Magnesium in PDB 7y3f: Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Enzymatic activity of Structure of the Anabaena Psi-Monomer-Isia Supercomplex
All present enzymatic activity of Structure of the Anabaena Psi-Monomer-Isia Supercomplex:
1.97.1.12;
Other elements in 7y3f:
The structure of Structure of the Anabaena Psi-Monomer-Isia Supercomplex also contains other interesting chemical elements:
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
30;
Page 4, Binding sites: 31 -
40;
Page 5, Binding sites: 41 -
50;
Page 6, Binding sites: 51 -
60;
Page 7, Binding sites: 61 -
70;
Page 8, Binding sites: 71 -
80;
Page 9, Binding sites: 81 -
90;
Page 10, Binding sites: 91 -
100;
Page 11, Binding sites: 101 -
110;
Page 12, Binding sites: 111 -
120;
Page 13, Binding sites: 121 -
130;
Page 14, Binding sites: 131 -
140;
Page 15, Binding sites: 141 -
150;
Page 16, Binding sites: 151 -
156;
Binding sites:
The binding sites of Magnesium atom in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
(pdb code 7y3f). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 156 binding sites of Magnesium where determined in the
Structure of the Anabaena Psi-Monomer-Isia Supercomplex, PDB code: 7y3f:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 1 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg801
b:40.4
occ:1.00
|
MG
|
A:CL0801
|
0.0
|
40.4
|
1.0
|
NE2
|
A:HIS677
|
2.0
|
36.8
|
1.0
|
ND
|
A:CL0801
|
2.0
|
40.6
|
1.0
|
NB
|
A:CL0801
|
2.0
|
40.6
|
1.0
|
NA
|
A:CL0801
|
2.1
|
40.8
|
1.0
|
NC
|
A:CL0801
|
2.1
|
40.8
|
1.0
|
CE1
|
A:HIS677
|
2.9
|
35.6
|
1.0
|
C4A
|
A:CL0801
|
3.0
|
41.0
|
1.0
|
C4D
|
A:CL0801
|
3.0
|
40.4
|
1.0
|
C4B
|
A:CL0801
|
3.0
|
40.8
|
1.0
|
C1C
|
A:CL0801
|
3.0
|
41.0
|
1.0
|
C1B
|
A:CL0801
|
3.0
|
40.6
|
1.0
|
CD2
|
A:HIS677
|
3.0
|
36.3
|
1.0
|
C1A
|
A:CL0801
|
3.1
|
40.9
|
1.0
|
C4C
|
A:CL0801
|
3.1
|
40.8
|
1.0
|
C1D
|
A:CL0801
|
3.2
|
40.6
|
1.0
|
CHB
|
A:CL0801
|
3.4
|
40.8
|
1.0
|
CHC
|
A:CL0801
|
3.4
|
41.3
|
1.0
|
CHA
|
A:CL0801
|
3.5
|
40.5
|
1.0
|
CHD
|
A:CL0801
|
3.7
|
40.7
|
1.0
|
ND1
|
A:HIS677
|
4.0
|
34.6
|
1.0
|
CG
|
A:HIS677
|
4.1
|
36.0
|
1.0
|
CAB
|
B:CLA801
|
4.2
|
45.9
|
1.0
|
C3B
|
B:CLA801
|
4.2
|
44.9
|
1.0
|
CZ
|
B:PHE627
|
4.3
|
60.2
|
1.0
|
C3D
|
A:CL0801
|
4.3
|
40.4
|
1.0
|
C3A
|
A:CL0801
|
4.3
|
41.0
|
1.0
|
C3B
|
A:CL0801
|
4.3
|
41.3
|
1.0
|
C2C
|
A:CL0801
|
4.4
|
41.5
|
1.0
|
C2B
|
A:CL0801
|
4.4
|
41.3
|
1.0
|
CHC
|
B:CLA801
|
4.4
|
43.0
|
1.0
|
C2A
|
A:CL0801
|
4.4
|
41.7
|
1.0
|
C4B
|
B:CLA801
|
4.4
|
43.2
|
1.0
|
CBB
|
B:CLA801
|
4.4
|
47.3
|
1.0
|
C3C
|
A:CL0801
|
4.4
|
41.6
|
1.0
|
C2D
|
A:CL0801
|
4.5
|
40.4
|
1.0
|
CMA
|
A:CL0801
|
4.8
|
40.7
|
1.0
|
CBD
|
A:CL0801
|
4.9
|
40.3
|
1.0
|
CZ
|
A:PHE673
|
5.0
|
39.0
|
1.0
|
|
Magnesium binding site 2 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 2 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg802
b:38.8
occ:1.00
|
MG
|
A:CLA802
|
0.0
|
38.8
|
1.0
|
ND
|
A:CLA802
|
2.0
|
38.6
|
1.0
|
NB
|
A:CLA802
|
2.0
|
38.7
|
1.0
|
O
|
A:HOH902
|
2.1
|
37.2
|
1.0
|
NC
|
A:CLA802
|
2.1
|
38.5
|
1.0
|
NA
|
A:CLA802
|
2.1
|
39.5
|
1.0
|
C4D
|
A:CLA802
|
3.0
|
38.8
|
1.0
|
C4B
|
A:CLA802
|
3.0
|
38.4
|
1.0
|
C1C
|
A:CLA802
|
3.0
|
38.2
|
1.0
|
C1B
|
A:CLA802
|
3.0
|
39.0
|
1.0
|
C4A
|
A:CLA802
|
3.0
|
40.1
|
1.0
|
C1A
|
A:CLA802
|
3.0
|
39.8
|
1.0
|
C4C
|
A:CLA802
|
3.1
|
38.3
|
1.0
|
C1D
|
A:CLA802
|
3.2
|
38.6
|
1.0
|
CHC
|
A:CLA802
|
3.4
|
38.0
|
1.0
|
CHA
|
A:CLA802
|
3.4
|
39.1
|
1.0
|
CHB
|
A:CLA802
|
3.4
|
39.3
|
1.0
|
CBB
|
B:CLA803
|
3.6
|
41.4
|
1.0
|
CHD
|
A:CLA802
|
3.6
|
38.7
|
1.0
|
CAB
|
B:CLA803
|
3.9
|
40.5
|
1.0
|
OD1
|
A:ASN601
|
4.1
|
41.3
|
1.0
|
C3D
|
A:CLA802
|
4.2
|
38.9
|
1.0
|
C3B
|
A:CLA802
|
4.3
|
38.8
|
1.0
|
C2B
|
A:CLA802
|
4.3
|
38.9
|
1.0
|
C2C
|
A:CLA802
|
4.3
|
38.5
|
1.0
|
C3A
|
A:CLA802
|
4.4
|
40.7
|
1.0
|
C2A
|
A:CLA802
|
4.4
|
41.1
|
1.0
|
C3C
|
A:CLA802
|
4.4
|
38.0
|
1.0
|
C2
|
A:CL0801
|
4.4
|
49.9
|
1.0
|
C2D
|
A:CLA802
|
4.5
|
38.7
|
1.0
|
C20
|
A:CL0801
|
4.6
|
55.2
|
1.0
|
CB
|
B:ALA665
|
4.6
|
37.3
|
1.0
|
CG
|
A:ASN601
|
4.8
|
40.5
|
1.0
|
C1
|
A:CL0801
|
4.8
|
49.8
|
1.0
|
C3B
|
B:CLA803
|
4.8
|
40.0
|
1.0
|
C3
|
A:CL0801
|
4.8
|
49.4
|
1.0
|
CBD
|
A:CLA802
|
4.8
|
39.6
|
1.0
|
ND2
|
A:ASN601
|
5.0
|
41.3
|
1.0
|
|
Magnesium binding site 3 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 3 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg803
b:40.0
occ:1.00
|
MG
|
A:CLA803
|
0.0
|
40.0
|
1.0
|
ND
|
A:CLA803
|
2.0
|
39.7
|
1.0
|
NB
|
A:CLA803
|
2.0
|
40.3
|
1.0
|
NA
|
A:CLA803
|
2.1
|
40.9
|
1.0
|
NC
|
A:CLA803
|
2.1
|
39.6
|
1.0
|
SD
|
A:MET685
|
2.4
|
37.0
|
1.0
|
C4A
|
A:CLA803
|
3.0
|
41.8
|
1.0
|
C1C
|
A:CLA803
|
3.0
|
39.3
|
1.0
|
C4D
|
A:CLA803
|
3.0
|
39.6
|
1.0
|
C1B
|
A:CLA803
|
3.0
|
40.8
|
1.0
|
C4B
|
A:CLA803
|
3.0
|
40.0
|
1.0
|
C1A
|
A:CLA803
|
3.0
|
41.5
|
1.0
|
C4C
|
A:CLA803
|
3.1
|
39.9
|
1.0
|
C1D
|
A:CLA803
|
3.2
|
39.9
|
1.0
|
CG
|
A:MET685
|
3.3
|
36.5
|
1.0
|
CHB
|
A:CLA803
|
3.4
|
41.1
|
1.0
|
CHC
|
A:CLA803
|
3.4
|
39.6
|
1.0
|
CHA
|
A:CLA803
|
3.5
|
40.0
|
1.0
|
CE
|
A:MET685
|
3.6
|
36.5
|
1.0
|
CHD
|
A:CLA803
|
3.6
|
40.0
|
1.0
|
NE1
|
B:TRP589
|
3.7
|
39.1
|
1.0
|
CB
|
A:MET685
|
3.8
|
36.5
|
1.0
|
CZ2
|
B:TRP589
|
4.3
|
39.3
|
1.0
|
C3D
|
A:CLA803
|
4.3
|
39.6
|
1.0
|
C2C
|
A:CLA803
|
4.3
|
40.2
|
1.0
|
C3B
|
A:CLA803
|
4.3
|
40.6
|
1.0
|
C3A
|
A:CLA803
|
4.3
|
42.6
|
1.0
|
CE2
|
B:TRP589
|
4.3
|
39.0
|
1.0
|
C2A
|
A:CLA803
|
4.4
|
43.5
|
1.0
|
C2B
|
A:CLA803
|
4.4
|
40.8
|
1.0
|
C3C
|
A:CLA803
|
4.4
|
40.1
|
1.0
|
C2D
|
A:CLA803
|
4.5
|
40.0
|
1.0
|
CD1
|
B:TRP589
|
4.8
|
38.9
|
1.0
|
CA
|
A:MET685
|
4.8
|
36.5
|
1.0
|
CMC
|
B:CLA802
|
4.9
|
38.3
|
1.0
|
CBD
|
A:CLA803
|
4.9
|
39.9
|
1.0
|
CH2
|
A:TRP694
|
5.0
|
38.1
|
1.0
|
|
Magnesium binding site 4 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 4 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg804
b:54.7
occ:1.00
|
MG
|
A:CLA804
|
0.0
|
54.7
|
1.0
|
NE2
|
A:HIS53
|
1.9
|
48.7
|
1.0
|
ND
|
A:CLA804
|
2.0
|
54.9
|
1.0
|
NB
|
A:CLA804
|
2.1
|
56.6
|
1.0
|
NC
|
A:CLA804
|
2.1
|
54.9
|
1.0
|
NA
|
A:CLA804
|
2.1
|
57.9
|
1.0
|
CE1
|
A:HIS53
|
2.9
|
47.7
|
1.0
|
C4D
|
A:CLA804
|
3.0
|
55.2
|
1.0
|
C4A
|
A:CLA804
|
3.0
|
59.7
|
1.0
|
C1C
|
A:CLA804
|
3.0
|
54.9
|
1.0
|
C1B
|
A:CLA804
|
3.0
|
57.8
|
1.0
|
CD2
|
A:HIS53
|
3.0
|
47.0
|
1.0
|
C1A
|
A:CLA804
|
3.1
|
58.7
|
1.0
|
C4B
|
A:CLA804
|
3.1
|
56.4
|
1.0
|
C4C
|
A:CLA804
|
3.1
|
54.4
|
1.0
|
C1D
|
A:CLA804
|
3.3
|
54.2
|
1.0
|
CHB
|
A:CLA804
|
3.4
|
58.2
|
1.0
|
CHC
|
A:CLA804
|
3.4
|
55.4
|
1.0
|
CHA
|
A:CLA804
|
3.5
|
56.5
|
1.0
|
CHD
|
A:CLA804
|
3.7
|
54.1
|
1.0
|
CB
|
J:PRO19
|
3.9
|
49.3
|
1.0
|
CG
|
J:PRO19
|
3.9
|
50.1
|
1.0
|
ND1
|
A:HIS53
|
4.0
|
45.8
|
1.0
|
CG
|
A:HIS53
|
4.1
|
46.5
|
1.0
|
C3D
|
A:CLA804
|
4.3
|
55.0
|
1.0
|
C2C
|
A:CLA804
|
4.4
|
55.1
|
1.0
|
C2B
|
A:CLA804
|
4.4
|
59.3
|
1.0
|
C3A
|
A:CLA804
|
4.4
|
62.3
|
1.0
|
C3B
|
A:CLA804
|
4.4
|
58.0
|
1.0
|
C2A
|
A:CLA804
|
4.4
|
63.0
|
1.0
|
C3C
|
A:CLA804
|
4.4
|
55.0
|
1.0
|
C2D
|
A:CLA804
|
4.5
|
55.2
|
1.0
|
C39
|
J:BCR104
|
4.8
|
81.3
|
1.0
|
CD
|
J:PRO19
|
4.9
|
50.2
|
1.0
|
CBD
|
A:CLA804
|
4.9
|
57.3
|
1.0
|
|
Magnesium binding site 5 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 5 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg805
b:50.0
occ:1.00
|
MG
|
A:CLA805
|
0.0
|
50.0
|
1.0
|
NE2
|
A:HIS57
|
1.9
|
47.9
|
1.0
|
ND
|
A:CLA805
|
2.0
|
50.3
|
1.0
|
NB
|
A:CLA805
|
2.0
|
50.4
|
1.0
|
NC
|
A:CLA805
|
2.1
|
49.6
|
1.0
|
NA
|
A:CLA805
|
2.1
|
51.5
|
1.0
|
CE1
|
A:HIS57
|
2.8
|
48.1
|
1.0
|
C4D
|
A:CLA805
|
3.0
|
50.8
|
1.0
|
C1C
|
A:CLA805
|
3.0
|
49.2
|
1.0
|
C4B
|
A:CLA805
|
3.0
|
50.0
|
1.0
|
C4A
|
A:CLA805
|
3.0
|
51.9
|
1.0
|
C1B
|
A:CLA805
|
3.0
|
50.6
|
1.0
|
C1A
|
A:CLA805
|
3.1
|
52.1
|
1.0
|
CD2
|
A:HIS57
|
3.1
|
47.6
|
1.0
|
C4C
|
A:CLA805
|
3.1
|
49.0
|
1.0
|
C1D
|
A:CLA805
|
3.3
|
49.9
|
1.0
|
CHB
|
A:CLA805
|
3.4
|
50.8
|
1.0
|
CHC
|
A:CLA805
|
3.4
|
49.9
|
1.0
|
CHA
|
A:CLA805
|
3.5
|
51.5
|
1.0
|
CHD
|
A:CLA805
|
3.7
|
49.0
|
1.0
|
ND1
|
A:HIS57
|
3.9
|
47.1
|
1.0
|
CG
|
A:HIS57
|
4.1
|
47.4
|
1.0
|
C3D
|
A:CLA805
|
4.3
|
50.8
|
1.0
|
C7
|
A:CLA812
|
4.3
|
76.2
|
1.0
|
C2C
|
A:CLA805
|
4.3
|
49.6
|
1.0
|
C3B
|
A:CLA805
|
4.3
|
50.1
|
1.0
|
C2B
|
A:CLA805
|
4.4
|
51.1
|
1.0
|
C3A
|
A:CLA805
|
4.4
|
53.8
|
1.0
|
C2A
|
A:CLA805
|
4.4
|
55.0
|
1.0
|
C3C
|
A:CLA805
|
4.4
|
49.1
|
1.0
|
CBB
|
A:CLA806
|
4.5
|
40.0
|
1.0
|
C2D
|
A:CLA805
|
4.5
|
50.8
|
1.0
|
CBB
|
A:CLA804
|
4.8
|
63.5
|
1.0
|
CBD
|
A:CLA805
|
4.9
|
50.8
|
1.0
|
|
Magnesium binding site 6 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 6 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg806
b:39.2
occ:1.00
|
MG
|
A:CLA806
|
0.0
|
39.2
|
1.0
|
ND
|
A:CLA806
|
2.0
|
39.3
|
1.0
|
NB
|
A:CLA806
|
2.0
|
38.4
|
1.0
|
NC
|
A:CLA806
|
2.1
|
38.7
|
1.0
|
NA
|
A:CLA806
|
2.1
|
40.6
|
1.0
|
NE2
|
A:HIS77
|
2.2
|
37.5
|
1.0
|
CD2
|
A:HIS77
|
3.0
|
37.5
|
1.0
|
C4D
|
A:CLA806
|
3.0
|
39.7
|
1.0
|
C1C
|
A:CLA806
|
3.0
|
38.4
|
1.0
|
C4A
|
A:CLA806
|
3.0
|
40.9
|
1.0
|
C4B
|
A:CLA806
|
3.0
|
37.6
|
1.0
|
C1B
|
A:CLA806
|
3.0
|
39.0
|
1.0
|
C1A
|
A:CLA806
|
3.0
|
41.8
|
1.0
|
CMB
|
A:CLA831
|
3.1
|
43.0
|
1.0
|
C4C
|
A:CLA806
|
3.1
|
38.1
|
1.0
|
CE1
|
A:HIS77
|
3.2
|
38.0
|
1.0
|
C1D
|
A:CLA806
|
3.2
|
39.0
|
1.0
|
CHB
|
A:CLA806
|
3.4
|
39.1
|
1.0
|
CHC
|
A:CLA806
|
3.4
|
37.8
|
1.0
|
CHA
|
A:CLA806
|
3.5
|
40.5
|
1.0
|
CHD
|
A:CLA806
|
3.7
|
38.8
|
1.0
|
CG
|
A:HIS77
|
4.1
|
37.8
|
1.0
|
ND1
|
A:HIS77
|
4.2
|
37.8
|
1.0
|
C3D
|
A:CLA806
|
4.2
|
39.9
|
1.0
|
C3B
|
A:CLA806
|
4.3
|
38.6
|
1.0
|
C2C
|
A:CLA806
|
4.3
|
38.5
|
1.0
|
C2B
|
A:CLA806
|
4.3
|
38.9
|
1.0
|
C2A
|
A:CLA806
|
4.3
|
44.3
|
1.0
|
C3A
|
A:CLA806
|
4.4
|
42.5
|
1.0
|
C3C
|
A:CLA806
|
4.4
|
38.6
|
1.0
|
CG2
|
A:ILE73
|
4.4
|
41.4
|
1.0
|
C2D
|
A:CLA806
|
4.5
|
39.5
|
1.0
|
C2B
|
A:CLA831
|
4.5
|
43.3
|
1.0
|
CBB
|
A:CLA831
|
4.7
|
42.6
|
1.0
|
CBD
|
A:CLA806
|
4.9
|
41.0
|
1.0
|
|
Magnesium binding site 7 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 7 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg807
b:43.7
occ:1.00
|
MG
|
A:CLA807
|
0.0
|
43.7
|
1.0
|
NE2
|
A:HIS80
|
1.9
|
41.5
|
1.0
|
ND
|
A:CLA807
|
2.0
|
44.1
|
1.0
|
NB
|
A:CLA807
|
2.0
|
43.3
|
1.0
|
NC
|
A:CLA807
|
2.1
|
42.8
|
1.0
|
NA
|
A:CLA807
|
2.1
|
45.3
|
1.0
|
CE1
|
A:HIS80
|
2.9
|
40.8
|
1.0
|
C4D
|
A:CLA807
|
3.0
|
45.1
|
1.0
|
C1C
|
A:CLA807
|
3.0
|
42.2
|
1.0
|
C1B
|
A:CLA807
|
3.0
|
43.8
|
1.0
|
C4B
|
A:CLA807
|
3.0
|
42.9
|
1.0
|
C4A
|
A:CLA807
|
3.0
|
45.5
|
1.0
|
CD2
|
A:HIS80
|
3.0
|
40.8
|
1.0
|
C1A
|
A:CLA807
|
3.0
|
46.7
|
1.0
|
C4C
|
A:CLA807
|
3.1
|
42.0
|
1.0
|
C1D
|
A:CLA807
|
3.3
|
43.9
|
1.0
|
CHC
|
A:CLA807
|
3.4
|
42.3
|
1.0
|
CHB
|
A:CLA807
|
3.4
|
44.0
|
1.0
|
CHA
|
A:CLA807
|
3.4
|
46.5
|
1.0
|
C16
|
A:CLA807
|
3.5
|
57.9
|
1.0
|
CHD
|
A:CLA807
|
3.7
|
43.4
|
1.0
|
C17
|
A:CLA807
|
3.8
|
58.3
|
1.0
|
ND1
|
A:HIS80
|
4.0
|
40.2
|
1.0
|
CG
|
A:HIS80
|
4.1
|
40.5
|
1.0
|
C3D
|
A:CLA807
|
4.2
|
45.4
|
1.0
|
C3B
|
A:CLA807
|
4.3
|
44.0
|
1.0
|
C2B
|
A:CLA807
|
4.3
|
43.9
|
1.0
|
C2C
|
A:CLA807
|
4.3
|
42.6
|
1.0
|
C3A
|
A:CLA807
|
4.4
|
47.5
|
1.0
|
C2A
|
A:CLA807
|
4.4
|
48.7
|
1.0
|
C3C
|
A:CLA807
|
4.4
|
42.8
|
1.0
|
CMA
|
A:CLA806
|
4.5
|
42.3
|
1.0
|
C2D
|
A:CLA807
|
4.5
|
44.5
|
1.0
|
CG2
|
A:VAL84
|
4.9
|
45.5
|
1.0
|
CBD
|
A:CLA807
|
4.9
|
48.5
|
1.0
|
C18
|
A:CLA807
|
4.9
|
59.6
|
1.0
|
C15
|
A:CLA807
|
4.9
|
58.1
|
1.0
|
C19
|
A:CLA807
|
5.0
|
60.4
|
1.0
|
|
Magnesium binding site 8 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 8 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg808
b:53.4
occ:1.00
|
MG
|
A:CLA808
|
0.0
|
53.4
|
1.0
|
NE2
|
A:HIS94
|
1.9
|
49.6
|
1.0
|
ND
|
A:CLA808
|
2.0
|
53.4
|
1.0
|
NB
|
A:CLA808
|
2.0
|
53.4
|
1.0
|
NC
|
A:CLA808
|
2.1
|
53.3
|
1.0
|
NA
|
A:CLA808
|
2.1
|
54.3
|
1.0
|
CE1
|
A:HIS94
|
2.9
|
49.5
|
1.0
|
C4D
|
A:CLA808
|
3.0
|
52.7
|
1.0
|
CD2
|
A:HIS94
|
3.0
|
48.5
|
1.0
|
C1B
|
A:CLA808
|
3.0
|
54.1
|
1.0
|
C1C
|
A:CLA808
|
3.0
|
52.5
|
1.0
|
C4A
|
A:CLA808
|
3.0
|
55.1
|
1.0
|
C4B
|
A:CLA808
|
3.1
|
53.0
|
1.0
|
C1A
|
A:CLA808
|
3.1
|
55.0
|
1.0
|
C4C
|
A:CLA808
|
3.1
|
53.7
|
1.0
|
C1D
|
A:CLA808
|
3.2
|
53.5
|
1.0
|
CHB
|
A:CLA808
|
3.4
|
54.5
|
1.0
|
CHC
|
A:CLA808
|
3.4
|
52.4
|
1.0
|
CHA
|
A:CLA808
|
3.4
|
53.3
|
1.0
|
CHD
|
A:CLA808
|
3.7
|
53.8
|
1.0
|
ND1
|
A:HIS94
|
4.0
|
49.4
|
1.0
|
C8
|
A:LMT854
|
4.0
|
80.3
|
1.0
|
CG
|
A:HIS94
|
4.1
|
48.3
|
1.0
|
C3D
|
A:CLA808
|
4.3
|
52.9
|
1.0
|
C2B
|
A:CLA808
|
4.3
|
54.5
|
1.0
|
C3B
|
A:CLA808
|
4.4
|
54.9
|
1.0
|
C2C
|
A:CLA808
|
4.4
|
54.0
|
1.0
|
C2A
|
A:CLA808
|
4.4
|
58.8
|
1.0
|
C3A
|
A:CLA808
|
4.4
|
56.5
|
1.0
|
C3C
|
A:CLA808
|
4.4
|
55.1
|
1.0
|
C2D
|
A:CLA808
|
4.5
|
53.0
|
1.0
|
C10
|
A:LMT854
|
4.6
|
81.0
|
1.0
|
CBD
|
A:CLA808
|
4.9
|
53.3
|
1.0
|
C9
|
A:LMT854
|
5.0
|
80.6
|
1.0
|
|
Magnesium binding site 9 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 9 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg809
b:44.2
occ:1.00
|
MG
|
A:CLA809
|
0.0
|
44.2
|
1.0
|
ND
|
A:CLA809
|
2.0
|
44.1
|
1.0
|
NB
|
A:CLA809
|
2.0
|
44.5
|
1.0
|
NC
|
A:CLA809
|
2.1
|
43.7
|
1.0
|
NA
|
A:CLA809
|
2.1
|
45.9
|
1.0
|
OE1
|
A:GLN116
|
2.2
|
43.4
|
1.0
|
C1C
|
A:CLA809
|
3.0
|
44.2
|
1.0
|
C4D
|
A:CLA809
|
3.0
|
43.9
|
1.0
|
C4A
|
A:CLA809
|
3.0
|
46.4
|
1.0
|
C4B
|
A:CLA809
|
3.0
|
44.3
|
1.0
|
C1B
|
A:CLA809
|
3.0
|
44.9
|
1.0
|
C1A
|
A:CLA809
|
3.1
|
46.0
|
1.0
|
CD
|
A:GLN116
|
3.1
|
43.6
|
1.0
|
C4C
|
A:CLA809
|
3.1
|
43.4
|
1.0
|
C1D
|
A:CLA809
|
3.2
|
43.9
|
1.0
|
NE2
|
A:GLN116
|
3.3
|
43.2
|
1.0
|
CHB
|
A:CLA809
|
3.4
|
45.2
|
1.0
|
CHC
|
A:CLA809
|
3.4
|
44.0
|
1.0
|
CHA
|
A:CLA809
|
3.5
|
44.3
|
1.0
|
CHD
|
A:CLA809
|
3.7
|
43.9
|
1.0
|
C6
|
A:CLA829
|
3.9
|
92.8
|
1.0
|
C3D
|
A:CLA809
|
4.3
|
43.3
|
1.0
|
C3B
|
A:CLA809
|
4.3
|
45.2
|
1.0
|
C2C
|
A:CLA809
|
4.3
|
44.0
|
1.0
|
C2B
|
A:CLA809
|
4.4
|
45.0
|
1.0
|
C3A
|
A:CLA809
|
4.4
|
47.0
|
1.0
|
C2A
|
A:CLA809
|
4.4
|
47.4
|
1.0
|
C3C
|
A:CLA809
|
4.4
|
43.9
|
1.0
|
C2D
|
A:CLA809
|
4.5
|
43.9
|
1.0
|
CG
|
A:GLN116
|
4.5
|
45.0
|
1.0
|
C5
|
A:CLA829
|
4.6
|
91.4
|
1.0
|
C7
|
A:CLA829
|
4.9
|
93.2
|
1.0
|
CBD
|
A:CLA809
|
4.9
|
44.2
|
1.0
|
CB
|
A:GLN116
|
5.0
|
45.5
|
1.0
|
O1A
|
A:CLA829
|
5.0
|
55.1
|
1.0
|
|
Magnesium binding site 10 out
of 156 in 7y3f
Go back to
Magnesium Binding Sites List in 7y3f
Magnesium binding site 10 out
of 156 in the Structure of the Anabaena Psi-Monomer-Isia Supercomplex
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Structure of the Anabaena Psi-Monomer-Isia Supercomplex within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg810
b:46.6
occ:1.00
|
MG
|
A:CLA810
|
0.0
|
46.6
|
1.0
|
ND
|
A:CLA810
|
2.0
|
45.9
|
1.0
|
NB
|
A:CLA810
|
2.0
|
47.0
|
1.0
|
NC
|
A:CLA810
|
2.1
|
45.8
|
1.0
|
NA
|
A:CLA810
|
2.1
|
48.0
|
1.0
|
OE1
|
A:GLN124
|
2.2
|
46.1
|
1.0
|
C4D
|
A:CLA810
|
3.0
|
45.8
|
1.0
|
C1B
|
A:CLA810
|
3.0
|
48.2
|
1.0
|
C1C
|
A:CLA810
|
3.0
|
46.0
|
1.0
|
C4B
|
A:CLA810
|
3.0
|
46.9
|
1.0
|
C4A
|
A:CLA810
|
3.0
|
49.3
|
1.0
|
C1A
|
A:CLA810
|
3.1
|
48.6
|
1.0
|
C4C
|
A:CLA810
|
3.1
|
46.0
|
1.0
|
C1D
|
A:CLA810
|
3.2
|
45.8
|
1.0
|
CD
|
A:GLN124
|
3.3
|
46.3
|
1.0
|
CHC
|
A:CLA810
|
3.4
|
46.9
|
1.0
|
CHB
|
A:CLA810
|
3.4
|
49.1
|
1.0
|
C19
|
A:CLA829
|
3.4
|
91.0
|
1.0
|
CHA
|
A:CLA810
|
3.4
|
46.8
|
1.0
|
CHD
|
A:CLA810
|
3.7
|
45.8
|
1.0
|
NE2
|
A:GLN124
|
3.8
|
46.0
|
1.0
|
C3D
|
A:CLA810
|
4.2
|
45.4
|
1.0
|
C3B
|
A:CLA810
|
4.3
|
49.3
|
1.0
|
C2B
|
A:CLA810
|
4.3
|
49.3
|
1.0
|
C2C
|
A:CLA810
|
4.3
|
46.8
|
1.0
|
C2A
|
A:CLA810
|
4.4
|
52.4
|
1.0
|
C3C
|
A:CLA810
|
4.4
|
46.9
|
1.0
|
C3A
|
A:CLA810
|
4.4
|
50.5
|
1.0
|
C2D
|
A:CLA810
|
4.4
|
45.0
|
1.0
|
C18
|
A:CLA829
|
4.5
|
90.2
|
1.0
|
CG
|
A:GLN124
|
4.5
|
46.8
|
1.0
|
CB
|
A:GLN124
|
4.7
|
47.7
|
1.0
|
C20
|
A:CLA829
|
4.8
|
91.5
|
1.0
|
C17
|
A:CLA829
|
4.8
|
88.1
|
1.0
|
CBD
|
A:CLA810
|
4.9
|
47.3
|
1.0
|
|
Reference:
R.Nagao,
K.Kato,
T.Hamaguchi,
Y.Ueno,
N.Tsuboshita,
S.Shimizu,
M.Furutani,
S.Ehira,
Y.Nakajima,
K.Kawakami,
T.Suzuki,
N.Dohmae,
S.Akimoto,
K.Yonekura,
J.R.Shen.
Structure of A Monomeric Photosystem I Core Associated with Iron-Stress-Induced-A Proteins From Anabaena Sp. Pcc 7120 Nat Commun V. 14 920 2023.
ISSN: ESSN 2041-1723
DOI: 10.1038/S41467-023-36504-1
Page generated: Thu Oct 3 13:27:20 2024
|