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Magnesium in PDB 7yia: Crystal Structure of K74A Mutant of CAP4 Saved Domain-Containing Receptor From Enterobacter Cloacae

Protein crystallography data

The structure of Crystal Structure of K74A Mutant of CAP4 Saved Domain-Containing Receptor From Enterobacter Cloacae, PDB code: 7yia was solved by T.-P.Ko, C.-S.Yang, M.-H.Hou, Y.-C.Wang, Y.Chen, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.90 / 2.43
Space group P 2 21 21
Cell size a, b, c (Å), α, β, γ (°) 56.901, 70.212, 150.734, 90, 90, 90
R / Rfree (%) 20.2 / 21.9

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of K74A Mutant of CAP4 Saved Domain-Containing Receptor From Enterobacter Cloacae (pdb code 7yia). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of K74A Mutant of CAP4 Saved Domain-Containing Receptor From Enterobacter Cloacae, PDB code: 7yia:

Magnesium binding site 1 out of 1 in 7yia

Go back to Magnesium Binding Sites List in 7yia
Magnesium binding site 1 out of 1 in the Crystal Structure of K74A Mutant of CAP4 Saved Domain-Containing Receptor From Enterobacter Cloacae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of K74A Mutant of CAP4 Saved Domain-Containing Receptor From Enterobacter Cloacae within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:45.6
occ:1.00
OD2 A:ASP49 2.6 46.1 1.0
O A:ILE73 2.9 45.3 1.0
CE1 A:HIS10 3.3 54.3 1.0
CD1 A:ILE94 3.4 72.0 1.0
CG A:ASP49 3.5 43.9 1.0
CB A:PRO44 3.5 64.0 1.0
NE2 A:GLN72 3.6 39.5 1.0
CG1 A:ILE94 3.8 67.9 1.0
OD1 A:ASP49 3.8 47.1 1.0
C A:ILE73 3.9 38.6 1.0
N A:ILE73 3.9 30.9 1.0
CG A:PRO44 4.0 68.6 1.0
CG A:GLN72 4.0 33.5 1.0
ND1 A:HIS10 4.2 57.3 1.0
CD A:GLN72 4.3 39.3 1.0
NE2 A:HIS10 4.3 64.2 1.0
CA A:PRO44 4.5 60.0 1.0
CA A:ILE73 4.5 31.9 1.0
C A:GLN72 4.7 29.7 1.0
CA A:GLN72 4.8 28.7 1.0
N A:ALA74 4.8 46.7 1.0
CB A:ASP49 4.9 38.7 1.0

Reference:

J.J.Chang, B.J.You, N.Tien, Y.C.Wang, C.S.Yang, M.H.Hou, Y.Chen. Specific Recognition of Cyclic Oligonucleotides By CAP4 For Phage Infection. Int.J.Biol.Macromol. V. 237 23656 2023.
ISSN: ISSN 0141-8130
PubMed: 36796558
DOI: 10.1016/J.IJBIOMAC.2023.123656
Page generated: Thu Oct 3 14:46:29 2024

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