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Magnesium in PDB 7zdc: If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3)

Other elements in 7zdc:

The structure of If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3) also contains other interesting chemical elements:

Iron (Fe) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3) (pdb code 7zdc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3), PDB code: 7zdc:

Magnesium binding site 1 out of 1 in 7zdc

Go back to Magnesium Binding Sites List in 7zdc
Magnesium binding site 1 out of 1 in the If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg602

b:25.6
occ:1.00
O3B D:ADP603 2.2 32.2 1.0
CB D:SER390 2.4 26.2 1.0
OG D:SER390 2.8 26.2 1.0
OE1 D:GLN430 3.4 34.3 1.0
PB D:ADP603 3.5 32.2 1.0
CA D:SER390 3.7 26.2 1.0
O2B D:ADP603 3.8 32.2 1.0
CD D:GLN430 3.9 34.3 1.0
NE2 D:GLN430 4.0 34.3 1.0
N D:SER390 4.1 26.2 1.0
OD1 D:ASP510 4.2 29.3 1.0
OD2 D:ASP510 4.3 29.3 1.0
OE1 D:GLU511 4.3 33.9 1.0
O1A D:ADP603 4.4 32.2 1.0
O1B D:ADP603 4.4 32.2 1.0
O3A D:ADP603 4.5 32.2 1.0
CG D:ASP510 4.7 29.3 1.0
C D:SER390 4.9 26.2 1.0
PA D:ADP603 4.9 32.2 1.0
CG D:GLN430 5.0 34.3 1.0

Reference:

D.Wu, S.Safarian. If(Heme/Confined) Conformation of Cyddc in Adp(Cydd) Bound State (Dataset-3) To Be Published.
Page generated: Thu Oct 3 16:24:50 2024

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