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Magnesium in PDB 7zde: If(Apo/As Isolated) Conformation of Cyddc in Amp-Pnp(Cydd) Bound State (Dataset-4)

Magnesium Binding Sites:

The binding sites of Magnesium atom in the If(Apo/As Isolated) Conformation of Cyddc in Amp-Pnp(Cydd) Bound State (Dataset-4) (pdb code 7zde). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the If(Apo/As Isolated) Conformation of Cyddc in Amp-Pnp(Cydd) Bound State (Dataset-4), PDB code: 7zde:

Magnesium binding site 1 out of 1 in 7zde

Go back to Magnesium Binding Sites List in 7zde
Magnesium binding site 1 out of 1 in the If(Apo/As Isolated) Conformation of Cyddc in Amp-Pnp(Cydd) Bound State (Dataset-4)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of If(Apo/As Isolated) Conformation of Cyddc in Amp-Pnp(Cydd) Bound State (Dataset-4) within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg601

b:72.1
occ:1.00
OG D:SER390 2.2 69.8 1.0
O2B D:ANP602 2.2 20.0 1.0
O1G D:ANP602 2.2 20.0 1.0
OE1 D:GLN430 3.0 72.3 1.0
CB D:SER390 3.1 69.8 1.0
PB D:ANP602 3.4 20.0 1.0
PG D:ANP602 3.4 20.0 1.0
N3B D:ANP602 3.6 20.0 1.0
OD1 D:ASP510 3.7 70.9 1.0
CD D:GLN430 4.0 72.3 1.0
CA D:SER390 4.2 69.8 1.0
OD2 D:ASP510 4.3 70.9 1.0
O3G D:ANP602 4.3 20.0 1.0
N D:SER390 4.3 69.8 1.0
NE2 D:GLN430 4.3 72.3 1.0
CG D:ASP510 4.3 70.9 1.0
O1B D:ANP602 4.4 20.0 1.0
O2A D:ANP602 4.4 20.0 1.0
O3A D:ANP602 4.5 20.0 1.0
O2G D:ANP602 4.5 20.0 1.0
OE2 D:GLU511 4.6 75.0 1.0
OE1 D:GLU511 4.7 75.0 1.0
PA D:ANP602 4.8 20.0 1.0
O1A D:ANP602 4.8 20.0 1.0
CD D:GLU511 4.9 75.0 1.0
NZ D:LYS389 4.9 73.3 1.0

Reference:

D.Wu, S.Safarian. If(Apo/As Isolated) Conformation of Cyddc in Amp-Pnp(Cydd) Bound State (Dataset-4) To Be Published.
Page generated: Thu Oct 3 16:25:20 2024

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