Magnesium in PDB 7zdk: If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8)

The binding sites of Magnesium atom in the If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8) (pdb code 7zdk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8), PDB code: 7zdk:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8) within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:21.1 occ:1.00 O1B C:ANP602 2.2 25.9 1.0 OG C:SER380 2.2 22.4 1.0 O2G C:ANP602 2.2 25.9 1.0 OE1 C:GLN421 2.3 20.6 1.0 CB C:SER380 2.9 22.4 1.0 PG C:ANP602 3.1 25.9 1.0 PB C:ANP602 3.3 25.9 1.0 O3G C:ANP602 3.3 25.9 1.0 CD C:GLN421 3.4 20.6 1.0 N3B C:ANP602 3.4 25.9 1.0 OD1 C:ASP499 3.8 25.2 1.0 OD2 C:ASP499 4.0 25.2 1.0 CA C:SER380 4.0 22.4 1.0 NE2 C:GLN421 4.0 20.6 1.0 OE1 C:GLU500 4.1 31.2 1.0 N C:SER380 4.2 22.4 1.0 O2A C:ANP602 4.2 25.9 1.0 O2B C:ANP602 4.2 25.9 1.0 CG C:ASP499 4.3 25.2 1.0 O3A C:ANP602 4.4 25.9 1.0 O1G C:ANP602 4.5 25.9 1.0 CD C:GLU500 4.6 31.2 1.0 CG C:GLN421 4.6 20.6 1.0 PA C:ANP602 4.8 25.9 1.0 CB C:GLN421 4.9 20.6 1.0

Magnesium binding site 2 out of 2 in the If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8) within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg601 b:28.1 occ:1.00 O1G D:ANP602 2.2 33.7 1.0 OG D:SER390 2.2 21.8 1.0 OE1 D:GLN430 2.2 26.0 1.0 O1B D:ANP602 2.3 33.7 1.0 CD D:GLN430 3.2 26.0 1.0 CB D:SER390 3.3 21.8 1.0 PG D:ANP602 3.5 33.7 1.0 PB D:ANP602 3.5 33.7 1.0 NE2 D:GLN430 3.6 26.0 1.0 N3B D:ANP602 3.7 33.7 1.0 OD2 D:ASP510 4.0 21.4 1.0 O3G D:ANP602 4.2 33.7 1.0 CA D:SER390 4.3 21.8 1.0 OD1 D:ASP510 4.4 21.4 1.0 N D:SER390 4.4 21.8 1.0 CG D:GLN430 4.4 26.0 1.0 O2B D:ANP602 4.5 33.7 1.0 O3A D:ANP602 4.5 33.7 1.0 O2G D:ANP602 4.6 33.7 1.0 CG D:ASP510 4.6 21.4 1.0 O2A D:ANP602 4.6 33.7 1.0

D.Wu, S.Safarian. If(Apo/Asym) Conformation of Cyddc in Amp-Pnp(Cydc)/Amp-Pnp(Cydd) Bound State (Dataset-8) To Be Published.