Magnesium in PDB 7znv: Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution

Enzymatic activity of Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution

All present enzymatic activity of Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution:
1.11.2.1;

Protein crystallography data

The structure of Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution, PDB code: 7znv was solved by W.X.Q.Robinson, T.Mielke, G.Grogan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 77.27 / 1.21
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 50.851, 74.168, 154.535, 90, 90, 90
R / Rfree (%) 14.9 / 16.5

Other elements in 7znv:

The structure of Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution also contains other interesting chemical elements:

Iron (Fe) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution (pdb code 7znv). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution, PDB code: 7znv:

Magnesium binding site 1 out of 1 in 7znv

Go back to Magnesium Binding Sites List in 7znv
Magnesium binding site 1 out of 1 in the Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Artificial Unspecific Peroxygenase Expressed in Pichia Pastoris at 1.21 Angstrom Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg303

b:8.9
occ:1.00
 OE2 A:GLU92 2.1 9.9 1.0
O A:HOH535 2.1 9.9 1.0
O A:HOH511 2.1 10.5 1.0
O1D A:HEM301 2.1 9.1 1.0
O A:HIS93 2.1 9.4 1.0
OG A:SER96 2.1 9.6 1.0
CGD A:HEM301 3.1 8.9 1.0
CD A:GLU92 3.1 10.2 1.0
C A:HIS93 3.3 9.3 1.0
CB A:SER96 3.4 9.3 1.0
O2D A:HEM301 3.4 9.7 1.0
N A:HIS93 3.5 9.4 1.0
CG A:GLU92 3.6 9.9 1.0
O A:HOH483 4.0 11.2 1.0
CA A:HIS93 4.0 9.7 1.0
O A:HOH503 4.1 10.0 1.0
OE1 A:GLU92 4.2 10.7 1.0
ND1 A:HIS93 4.3 10.5 1.0
N A:ASP94 4.3 9.6 1.0
O A:HOH419 4.4 11.0 1.0
CA A:SER96 4.4 9.1 1.0
CBD A:HEM301 4.4 9.0 1.0
N A:SER96 4.5 9.0 1.0
O A:ASN107 4.5 11.3 1.0
C A:GLU92 4.5 9.5 1.0
CE1 A:HIS93 4.6 10.1 1.0
O A:GLU100 4.6 11.1 1.0
CA A:ASP94 4.6 9.7 1.0
CG A:HIS93 4.6 9.8 1.0
CB A:ARG99 4.6 10.7 1.0
CA A:GLU92 4.7 9.4 1.0
CB A:GLU92 4.8 9.6 1.0
C A:ASP94 4.8 9.4 1.0
CB A:ASN107 4.8 11.4 1.0
CAD A:HEM301 4.9 9.4 1.0
CB A:HIS93 5.0 9.9 1.0

Reference:

W.X.Q.Robinson, T.Mielke, B.Melling, A.Cuetos, A.Parkin, W.P.Unsworth, J.Cartwright, G.Grogan. Comparing the Catalytic and Structural Characteristics of A 'Short' Unspecific Peroxygenase (Upo) Expressed in Pichia Pastoris and Escherichia Coli. Chembiochem V. 24 00558 2023.
ISSN: ESSN 1439-7633
PubMed: 36374006
DOI: 10.1002/CBIC.202200558
Page generated: Thu Oct 3 17:03:25 2024

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