Atomistry » Magnesium » PDB 7zp9-8a12 » 7zz2
Atomistry »
  Magnesium »
    PDB 7zp9-8a12 »
      7zz2 »

Magnesium in PDB 7zz2: Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa

Enzymatic activity of Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa

All present enzymatic activity of Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa:
6.4.1.1;

Other elements in 7zz2:

The structure of Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa also contains other interesting chemical elements:

Manganese (Mn) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa (pdb code 7zz2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa, PDB code: 7zz2:

Magnesium binding site 1 out of 1 in 7zz2

Go back to Magnesium Binding Sites List in 7zz2
Magnesium binding site 1 out of 1 in the Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of "Ct Pyr" Conformation of Lactococcus Lactis Pyruvate Carboxylase with Acetyl-Coa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg1201

b:78.2
occ:1.00
O A:HOH1330 2.4 63.2 1.0
O A:THR522 2.6 63.8 1.0
O A:VAL519 2.7 60.9 1.0
OD2 A:ASP753 2.8 71.8 1.0
C A:THR522 3.8 62.0 1.0
CG A:ASP753 3.8 71.3 1.0
O A:LYS520 3.8 71.4 1.0
C A:VAL519 3.9 55.3 1.0
CB A:ASP753 4.1 62.4 1.0
NH2 A:ARG783 4.1 59.3 1.0
C A:LYS520 4.1 62.1 1.0
CA A:LYS520 4.2 53.9 1.0
N A:THR522 4.3 65.5 1.0
CA A:ASP753 4.3 55.4 1.0
O A:GLU524 4.3 72.4 1.0
CA A:THR522 4.4 60.8 1.0
CB A:THR522 4.4 61.1 1.0
N A:LYS520 4.5 57.1 1.0
CG1 A:VAL519 4.7 47.1 1.0
N A:LYS523 4.8 69.8 1.0
OD1 A:ASP753 4.8 67.8 1.0

Reference:

J.P.Lopez-Alonso, M.Lazaro, D.Gil-Carton, P.H.Choi, L.Tong, M.Valle. Cryoem Structural Exploration of Catalytically Active Enzyme Pyruvate Carboxylase. Nat Commun V. 13 6185 2022.
ISSN: ESSN 2041-1723
PubMed: 36261450
DOI: 10.1038/S41467-022-33987-2
Page generated: Thu Oct 3 17:07:33 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy