Magnesium in PDB 821p: Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras

Protein crystallography data

The structure of Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras, PDB code: 821p was solved by A.J.Scheidig, U.Krengel, E.F.Pai, W.Kabsch, A.Wittinghofer, R.S.Goody, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 6.00 / 1.50
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 40.200, 40.200, 160.100, 90.00, 90.00, 120.00
R / Rfree (%) 22 / n/a

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras (pdb code 821p). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras, PDB code: 821p:

Magnesium binding site 1 out of 1 in 821p

Go back to Magnesium Binding Sites List in 821p
Magnesium binding site 1 out of 1 in the Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg168

b:13.6
occ:1.00
O2G A:GNP167 2.2 14.0 1.0
O A:HOH173 2.2 13.6 1.0
OG A:SER17 2.3 10.9 1.0
O A:HOH172 2.3 10.6 1.0
O2B A:GNP167 2.3 10.6 1.0
OG1 A:THR35 2.3 13.2 1.0
H2 A:HOH173 2.8 15.0 1.0
HG A:SER17 2.9 15.0 1.0
H2 A:HOH172 3.0 15.0 1.0
H1 A:HOH173 3.0 15.0 1.0
H1 A:HOH172 3.0 15.0 1.0
HG1 A:THR35 3.1 15.0 1.0
CB A:THR35 3.2 11.7 1.0
PG A:GNP167 3.3 11.9 1.0
CB A:SER17 3.3 10.2 1.0
H A:SER17 3.3 15.0 1.0
PB A:GNP167 3.3 12.2 1.0
HNB3 A:GNP167 3.4 15.0 1.0
N3B A:GNP167 3.4 12.3 1.0
H A:THR35 3.5 15.0 1.0
N A:THR35 3.8 12.3 1.0
N A:SER17 3.9 9.9 1.0
OD2 A:ASP57 4.1 14.6 1.0
CA A:THR35 4.1 13.4 1.0
CA A:SER17 4.1 8.8 1.0
CG2 A:THR35 4.2 13.2 1.0
O2A A:GNP167 4.2 12.9 1.0
OD1 A:ASP57 4.2 14.0 1.0
O3G A:GNP167 4.2 14.3 1.0
O1G A:GNP167 4.3 15.3 1.0
O1B A:GNP167 4.4 10.0 1.0
O3A A:GNP167 4.4 11.8 1.0
O A:HOH171 4.4 22.7 1.0
O A:THR58 4.4 15.5 1.0
CG A:ASP57 4.5 13.2 1.0
PA A:GNP167 4.6 12.6 1.0
O A:ASP33 4.6 14.6 1.0
HZ2 A:LYS16 4.7 15.0 1.0
O1A A:GNP167 4.7 12.9 1.0
CB A:LYS16 4.7 6.1 1.0
C A:PRO34 4.8 14.7 1.0
CE A:LYS16 4.8 10.3 1.0
H1 A:HOH185 4.9 15.0 1.0
H1 A:HOH170 5.0 15.0 1.0

Reference:

S.M.Franken, A.J.Scheidig, U.Krengel, H.Rensland, A.Lautwein, M.Geyer, K.Scheffzek, R.S.Goody, H.R.Kalbitzer, E.F.Pai, A.Wittinghofer. Three-Dimensional Structures and Properties of A Transforming and A Nontransforming Glycine-12 Mutant of P21H-Ras. Biochemistry V. 32 8411 1993.
ISSN: ISSN 0006-2960
PubMed: 8357792
DOI: 10.1021/BI00084A005
Page generated: Thu Oct 3 17:08:27 2024

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