Magnesium in PDB 8act: Structure of the Human Beta-Cardiac Myosin Folded-Back Off State
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Structure of the Human Beta-Cardiac Myosin Folded-Back Off State
(pdb code 8act). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the
Structure of the Human Beta-Cardiac Myosin Folded-Back Off State, PDB code: 8act:
Jump to Magnesium binding site number:
1;
2;
Magnesium binding site 1 out
of 2 in 8act
Go back to
Magnesium Binding Sites List in 8act
Magnesium binding site 1 out
of 2 in the Structure of the Human Beta-Cardiac Myosin Folded-Back Off State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Structure of the Human Beta-Cardiac Myosin Folded-Back Off State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1003
b:126.0
occ:1.00
|
O2B
|
A:ADP1001
|
2.0
|
118.8
|
1.0
|
OG
|
A:SER242
|
2.0
|
128.1
|
1.0
|
O4
|
A:PO41002
|
2.2
|
131.2
|
1.0
|
O1B
|
A:ADP1001
|
2.2
|
118.8
|
1.0
|
PB
|
A:ADP1001
|
2.4
|
118.8
|
1.0
|
O2
|
A:PO41002
|
3.0
|
131.2
|
1.0
|
CB
|
A:SER242
|
3.0
|
128.1
|
1.0
|
P
|
A:PO41002
|
3.1
|
131.2
|
1.0
|
O3B
|
A:ADP1001
|
3.2
|
118.8
|
1.0
|
N
|
A:SER242
|
3.4
|
128.1
|
1.0
|
OG1
|
A:THR185
|
3.5
|
114.1
|
1.0
|
O3A
|
A:ADP1001
|
3.8
|
118.8
|
1.0
|
CA
|
A:SER242
|
3.8
|
128.1
|
1.0
|
O1
|
A:PO41002
|
3.9
|
131.2
|
1.0
|
CE
|
A:LYS184
|
4.3
|
108.5
|
1.0
|
O1A
|
A:ADP1001
|
4.3
|
118.8
|
1.0
|
O3
|
A:PO41002
|
4.3
|
131.2
|
1.0
|
C
|
A:SER241
|
4.4
|
129.1
|
1.0
|
PA
|
A:ADP1001
|
4.6
|
118.8
|
1.0
|
ND2
|
A:ASN238
|
4.6
|
123.8
|
1.0
|
O
|
A:SER242
|
4.6
|
128.1
|
1.0
|
CA
|
A:SER241
|
4.7
|
129.1
|
1.0
|
C
|
A:SER242
|
4.8
|
128.1
|
1.0
|
NZ
|
A:LYS184
|
4.8
|
108.5
|
1.0
|
N
|
A:THR185
|
4.8
|
114.1
|
1.0
|
CB
|
A:LYS184
|
4.8
|
108.5
|
1.0
|
N
|
A:GLY181
|
4.8
|
122.4
|
1.0
|
CB
|
A:THR185
|
4.8
|
114.1
|
1.0
|
O
|
A:ASN240
|
4.9
|
119.8
|
1.0
|
OD1
|
A:ASP461
|
4.9
|
134.9
|
1.0
|
O2A
|
A:ADP1001
|
4.9
|
118.8
|
1.0
|
O
|
A:ILE462
|
5.0
|
123.7
|
1.0
|
|
Magnesium binding site 2 out
of 2 in 8act
Go back to
Magnesium Binding Sites List in 8act
Magnesium binding site 2 out
of 2 in the Structure of the Human Beta-Cardiac Myosin Folded-Back Off State
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Structure of the Human Beta-Cardiac Myosin Folded-Back Off State within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg1003
b:158.9
occ:1.00
|
O2B
|
B:ADP1001
|
1.8
|
169.8
|
1.0
|
O3
|
B:PO41002
|
2.1
|
183.2
|
1.0
|
OG1
|
B:THR185
|
2.1
|
157.8
|
1.0
|
O3B
|
B:ADP1001
|
2.3
|
169.8
|
1.0
|
PB
|
B:ADP1001
|
2.4
|
169.8
|
1.0
|
OG
|
B:SER242
|
3.0
|
176.0
|
1.0
|
O1B
|
B:ADP1001
|
3.3
|
169.8
|
1.0
|
P
|
B:PO41002
|
3.3
|
183.2
|
1.0
|
CB
|
B:THR185
|
3.4
|
157.8
|
1.0
|
CB
|
B:SER242
|
3.7
|
176.0
|
1.0
|
O1
|
B:PO41002
|
3.7
|
183.2
|
1.0
|
O3A
|
B:ADP1001
|
3.8
|
169.8
|
1.0
|
N
|
B:SER242
|
3.8
|
176.0
|
1.0
|
O2
|
B:PO41002
|
3.9
|
183.2
|
1.0
|
O
|
B:ASN240
|
3.9
|
179.8
|
1.0
|
N
|
B:THR185
|
4.0
|
157.8
|
1.0
|
NZ
|
B:LYS184
|
4.0
|
155.0
|
1.0
|
CA
|
B:THR185
|
4.3
|
157.8
|
1.0
|
CG2
|
B:THR185
|
4.3
|
157.8
|
1.0
|
O1A
|
B:ADP1001
|
4.4
|
169.8
|
1.0
|
CA
|
B:SER242
|
4.4
|
176.0
|
1.0
|
OD2
|
B:ASP461
|
4.5
|
136.8
|
1.0
|
PA
|
B:ADP1001
|
4.5
|
169.8
|
1.0
|
O4
|
B:PO41002
|
4.5
|
183.2
|
1.0
|
O2A
|
B:ADP1001
|
4.6
|
169.8
|
1.0
|
OD1
|
B:ASP461
|
4.6
|
136.8
|
1.0
|
CE
|
B:LYS184
|
4.7
|
155.0
|
1.0
|
C
|
B:SER241
|
4.8
|
179.1
|
1.0
|
CA
|
B:SER241
|
4.9
|
179.1
|
1.0
|
ND2
|
B:ASN232
|
5.0
|
185.5
|
1.0
|
CG
|
B:ASP461
|
5.0
|
136.8
|
1.0
|
|
Reference:
A.Grinzato,
D.Auguin,
C.Kikuti,
N.Nandwani,
D.Moussaoui,
D.Pathak,
E.Kandiah,
K.M.Ruppel,
J.A.Spudich,
A.Houdusse,
J.Robert-Paganin.
Cryo-Em Structure of the Folded-Back State of Human Beta-Cardiac Myosin. Nat Commun V. 14 3166 2023.
ISSN: ESSN 2041-1723
PubMed: 37258552
DOI: 10.1038/S41467-023-38698-W
Page generated: Thu Oct 3 18:03:57 2024
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