Magnesium in PDB 8ad3: X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A

All present enzymatic activity of X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A:
7.2.1.1;

The structure of X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A, PDB code: 8ad3 was solved by G.Fritz, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.98 / 1.55
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	73.54, 89.49, 89.59, 90, 90, 90
R / Rfree (%)	17.4 / 20.4

The binding sites of Magnesium atom in the X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A (pdb code 8ad3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A, PDB code: 8ad3:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg502 b:24.0 occ:1.00 O A:LYS143 2.3 21.5 1.0 O A:HOH776 2.3 45.2 1.0 O A:MET317 2.4 23.0 1.0 O A:ARG315 2.4 27.9 1.0 OH A:TYR188 2.5 26.7 1.0 C A:LYS143 3.3 19.5 1.0 C A:ARG315 3.5 24.9 1.0 C A:MET317 3.6 21.7 1.0 CZ A:TYR188 3.6 25.5 1.0 CE1 A:TYR188 3.8 23.6 1.0 N A:MET317 4.0 21.6 1.0 O A:HOH630 4.1 44.5 1.0 C A:GLU316 4.1 22.1 1.0 N A:ALA144 4.2 22.7 1.0 CA A:LYS143 4.2 19.9 1.0 CB A:PHE318 4.2 22.7 1.0 NZ A:LYS187 4.3 44.5 1.0 CA A:ALA144 4.4 19.5 1.0 N A:GLU316 4.4 21.7 1.0 CA A:ARG315 4.4 25.3 1.0 CA A:GLU316 4.4 21.7 1.0 CA A:MET317 4.4 21.3 0.4 CA A:MET317 4.4 21.2 0.6 N A:PHE318 4.5 22.3 1.0 CA A:PHE318 4.6 21.3 1.0 O A:GLU316 4.6 22.4 1.0 O A:LYS314 4.7 23.5 1.0 CE2 A:TYR188 4.8 22.8 1.0 O A:HOH790 4.8 42.8 1.0 CE A:LYS187 4.9 44.1 1.0 CD1 A:PHE318 4.9 21.6 1.0 CB A:LYS143 4.9 24.6 1.0

Magnesium binding site 2 out of 2 in the X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of X-Ray Structure of Nqrf(129-408)of Vibrio Cholerae Variant F406A within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg502 b:57.5 occ:1.00 O B:HOH644 1.7 60.3 1.0 O B:GLU329 2.2 32.7 1.0 C B:GLU329 3.3 32.5 1.0 O B:HOH692 3.8 45.2 1.0 CA B:GLU329 3.8 28.4 1.0 O B:HOH741 3.9 39.8 1.0 CB B:GLU329 4.1 28.7 1.0 N B:ASN330 4.4 26.1 1.0 CA B:ASN330 4.7 24.4 1.0 OD1 B:ASN330 4.8 27.6 1.0 CG B:GLU329 4.9 36.5 1.0

G.Fritz, G.Fritz. N/A N/A.
ISSN: ESSN 1545-9985