Magnesium in PDB 8b3d: Structure of the Pol II-Tcr-ELOF1 Complex.

All present enzymatic activity of Structure of the Pol II-Tcr-ELOF1 Complex.:
2.7.7.6;

The structure of Structure of the Pol II-Tcr-ELOF1 Complex. also contains other interesting chemical elements:

Zinc	(Zn)	10 atoms
Fluorine	(F)	3 atoms

The binding sites of Magnesium atom in the Structure of the Pol II-Tcr-ELOF1 Complex. (pdb code 8b3d). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Structure of the Pol II-Tcr-ELOF1 Complex., PDB code: 8b3d:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Structure of the Pol II-Tcr-ELOF1 Complex.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the Pol II-Tcr-ELOF1 Complex. within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2003 b:6.9 occ:1.00 HO3' P:A10 1.8 18.1 1.0 OD1 A:ASP495 2.0 8.1 1.0 OD1 A:ASP499 2.0 6.7 1.0 O3' P:A10 2.2 18.1 1.0 OD1 A:ASP497 2.2 13.3 1.0 CG A:ASP499 2.6 6.7 1.0 OD2 A:ASP499 2.6 6.7 1.0 HO2' P:A10 2.6 18.1 1.0 CG A:ASP495 3.0 8.1 1.0 CG A:ASP497 3.2 13.3 1.0 O2' P:A10 3.3 18.1 1.0 C3' P:A10 3.4 18.1 1.0 OD2 A:ASP497 3.4 13.3 1.0 H A:ASP495 3.5 8.1 1.0 OD2 A:ASP495 3.5 8.1 1.0 H4' P:A10 3.5 18.1 1.0 H A:ASP497 3.8 13.3 1.0 C2' P:A10 3.9 18.1 1.0 C4' P:A10 3.9 18.1 1.0 HH21 A:ARG460 4.0 1.9 1.0 CB A:ASP499 4.1 6.7 1.0 O A:ASP495 4.1 8.1 1.0 H3' P:A10 4.1 18.1 1.0 H A:ASP499 4.2 6.7 1.0 N A:ASP495 4.3 8.1 1.0 CB A:ASP495 4.3 8.1 1.0 H2' P:A10 4.3 18.1 1.0 C A:ASP495 4.4 8.1 1.0 H5'' P:A10 4.4 18.1 1.0 HB2 A:ASP499 4.5 6.7 1.0 CA A:ASP495 4.5 8.1 1.0 CB A:ASP497 4.6 13.3 1.0 N A:ASP497 4.6 13.3 1.0 N A:ASP499 4.6 6.7 1.0 HB3 A:ASP499 4.6 6.7 1.0 HA A:ASP499 4.6 6.7 1.0 NH2 A:ARG460 4.6 1.9 1.0 CA A:ASP499 4.7 6.7 1.0 C5' P:A10 4.7 18.1 1.0 O A:ASP497 4.7 13.3 1.0 HB3 A:ASP495 4.8 8.1 1.0 HE A:ARG460 4.8 1.9 1.0 C A:ASP497 4.8 13.3 1.0 HA A:ALA494 4.9 3.4 1.0 CA A:ASP497 4.9 13.3 1.0 HB2 A:ASP495 4.9 8.1 1.0 HH22 A:ARG460 5.0 1.9 1.0 HB3 A:ASP497 5.0 13.3 1.0

Magnesium binding site 2 out of 2 in the Structure of the Pol II-Tcr-ELOF1 Complex.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the Pol II-Tcr-ELOF1 Complex. within 5.0Å range: probe atom residue distance (Å) B Occ b:Mg1503 b:18.3 occ:1.00 O1B b:ADP1501 2.0 37.1 1.0 F3 b:BEF1502 2.0 30.9 1.0 PB b:ADP1501 3.4 37.1 1.0 OD2 b:ASP646 3.6 29.1 1.0 BE b:BEF1502 3.6 30.9 1.0 OD1 b:ASP646 3.6 29.1 1.0 O3A b:ADP1501 3.7 37.1 1.0 OG1 b:THR539 3.7 32.1 1.0 HA2 b:GLY920 3.7 30.0 1.0 HG1 b:THR539 3.8 32.1 1.0 HA3 b:GLY920 3.9 30.0 1.0 CG b:ASP646 4.0 29.1 1.0 O b:GLY920 4.2 30.0 1.0 O1A b:ADP1501 4.2 37.1 1.0 O3B b:ADP1501 4.2 37.1 1.0 CA b:GLY920 4.3 30.0 1.0 PA b:ADP1501 4.3 37.1 1.0 F2 b:BEF1502 4.3 30.9 1.0 OE2 b:GLU647 4.3 30.0 1.0 F1 b:BEF1502 4.3 30.9 1.0 HE21 b:GLN580 4.4 30.8 1.0 H b:THR539 4.4 32.1 1.0 O2A b:ADP1501 4.4 37.1 1.0 HH12 b:ARG950 4.4 34.3 1.0 HE2 b:LYS538 4.4 32.0 1.0 HB2 b:LYS538 4.4 32.0 1.0 O2B b:ADP1501 4.5 37.1 1.0 HE1 b:TRP581 4.5 30.6 1.0 HE22 b:GLN580 4.5 30.8 1.0 C b:GLY920 4.7 30.0 1.0 HD12 b:LEU673 4.8 28.9 1.0 NE2 b:GLN580 4.8 30.8 1.0 HG2 b:GLU647 4.9 30.0 1.0 HH11 b:ARG950 4.9 34.3 1.0 CD b:GLU647 4.9 30.0 1.0 HZ2 b:TRP581 4.9 30.6 1.0 CB b:THR539 4.9 32.1 1.0 NH1 b:ARG950 5.0 34.3 1.0 N b:THR539 5.0 32.1 1.0 HZ1 b:LYS538 5.0 32.0 1.0

G.Kokic, P.Cramer. Structure of the Pol II-Tcr-ELOF1 Complex. To Be Published.