Magnesium in PDB 8b3f: Pol II-Csb-Csa-DDB1-ELOF1

All present enzymatic activity of Pol II-Csb-Csa-DDB1-ELOF1:
2.7.7.6;

The structure of Pol II-Csb-Csa-DDB1-ELOF1 also contains other interesting chemical elements:

Zinc

(Zn)

9 atoms

The binding sites of Magnesium atom in the Pol II-Csb-Csa-DDB1-ELOF1 (pdb code 8b3f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Pol II-Csb-Csa-DDB1-ELOF1, PDB code: 8b3f:

Magnesium binding site 1 out of 1 in the Pol II-Csb-Csa-DDB1-ELOF1


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pol II-Csb-Csa-DDB1-ELOF1 within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg2003 b:6.9 occ:1.00 HO3' P:A10 1.8 18.1 1.0 OD1 A:ASP495 2.0 8.1 1.0 OD1 A:ASP499 2.0 6.7 1.0 O3' P:A10 2.2 18.1 1.0 OD1 A:ASP497 2.2 13.3 1.0 CG A:ASP499 2.6 6.7 1.0 OD2 A:ASP499 2.6 6.7 1.0 HO2' P:A10 2.6 18.1 1.0 CG A:ASP495 3.0 8.1 1.0 CG A:ASP497 3.2 13.3 1.0 O2' P:A10 3.3 18.1 1.0 C3' P:A10 3.4 18.1 1.0 OD2 A:ASP497 3.4 13.3 1.0 H A:ASP495 3.5 8.1 1.0 OD2 A:ASP495 3.5 8.1 1.0 H4' P:A10 3.5 18.1 1.0 H A:ASP497 3.8 13.3 1.0 C2' P:A10 3.9 18.1 1.0 C4' P:A10 3.9 18.1 1.0 HH21 A:ARG460 4.0 1.9 1.0 O A:ASP495 4.1 8.1 1.0 CB A:ASP499 4.1 6.7 1.0 H3' P:A10 4.1 18.1 1.0 H A:ASP499 4.2 6.7 1.0 N A:ASP495 4.3 8.1 1.0 CB A:ASP495 4.3 8.1 1.0 H2' P:A10 4.3 18.1 1.0 C A:ASP495 4.4 8.1 1.0 H5'' P:A10 4.4 18.1 1.0 HB2 A:ASP499 4.5 6.7 1.0 CA A:ASP495 4.5 8.1 1.0 CB A:ASP497 4.6 13.3 1.0 N A:ASP497 4.6 13.3 1.0 N A:ASP499 4.6 6.7 1.0 HB3 A:ASP499 4.6 6.7 1.0 HA A:ASP499 4.6 6.7 1.0 NH2 A:ARG460 4.6 1.9 1.0 CA A:ASP499 4.7 6.7 1.0 C5' P:A10 4.7 18.1 1.0 O A:ASP497 4.7 13.3 1.0 HB3 A:ASP495 4.8 8.1 1.0 HE A:ARG460 4.8 1.9 1.0 C A:ASP497 4.8 13.3 1.0 HA A:ALA494 4.9 3.4 1.0 CA A:ASP497 4.9 13.3 1.0 HB2 A:ASP495 4.9 8.1 1.0 HH22 A:ARG460 5.0 1.9 1.0 HB3 A:ASP497 5.0 13.3 1.0

G.Kokic, P.Cramer. Pol II-Csb-Csa-DDB1-ELOF1 Structure. To Be Published.