Magnesium in PDB 8b3s: Structure of Yjba in Complex with Clpc N-Terminal Domain

Protein crystallography data

The structure of Structure of Yjba in Complex with Clpc N-Terminal Domain, PDB code: 8b3s was solved by N.J.Evans, R.L.Isaacson, A.H.Camp, M.K.Collins, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 29.87 / 2.09
Space group P 31
Cell size a, b, c (Å), α, β, γ (°) 69.713, 69.713, 89.601, 90, 90, 120
R / Rfree (%) 18.5 / 23.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Structure of Yjba in Complex with Clpc N-Terminal Domain (pdb code 8b3s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Structure of Yjba in Complex with Clpc N-Terminal Domain, PDB code: 8b3s:

Magnesium binding site 1 out of 1 in 8b3s

Go back to Magnesium Binding Sites List in 8b3s
Magnesium binding site 1 out of 1 in the Structure of Yjba in Complex with Clpc N-Terminal Domain


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Yjba in Complex with Clpc N-Terminal Domain within 5.0Å range:
probe atom residue distance (Å) B Occ
Z:Mg203

b:25.3
occ:1.00
O Z:HOH315 2.9 38.3 1.0
OG1 Z:THR7 3.0 36.2 1.0
O Z:HOH366 3.0 60.6 1.0
N Z:THR105 3.4 30.1 1.0
O Z:HOH361 3.5 56.1 1.0
CA Z:GLY104 3.5 24.0 1.0
CG2 Z:THR105 3.9 28.5 1.0
CB Z:THR7 3.9 26.0 1.0
CB Z:ARG9 3.9 30.9 1.0
CD Z:ARG9 4.0 41.1 1.0
NE Z:ARG9 4.0 55.0 1.0
C Z:GLY104 4.0 31.0 1.0
CG2 Z:THR7 4.1 23.8 1.0
OG1 Z:THR105 4.2 29.9 1.0
OE1 Z:GLU106 4.3 37.9 1.0
N Z:ALA10 4.4 23.1 1.0
CB Z:THR105 4.4 32.4 1.0
CG Z:ARG9 4.4 38.6 1.0
CA Z:THR105 4.5 31.2 1.0
O Z:HOH334 4.6 28.1 1.0
O Z:HOH316 4.7 41.0 1.0
N Z:GLY104 4.8 25.6 1.0
CA Z:ARG9 4.9 25.5 1.0
C Z:ARG9 4.9 28.6 1.0
CB Z:ALA10 4.9 26.5 1.0

Reference:

N.J.Evans, R.L.Isaacson. Structure of Yjba in Complex with Clpc N-Terminal Domain To Be Published.
Page generated: Thu Oct 3 19:10:59 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy