Magnesium in PDB 8c8i: Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl)

Enzymatic activity of Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl)

All present enzymatic activity of Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl):
3.6.1.23;

Protein crystallography data

The structure of Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl), PDB code: 8c8i was solved by B.K.Kohegyi, K.Nyiri, B.G.Vertessy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 52.69 / 3.20
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 78.45, 82.66, 139.6, 90, 90, 90
R / Rfree (%) 19.3 / 25.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl) (pdb code 8c8i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl), PDB code: 8c8i:

Magnesium binding site 1 out of 1 in 8c8i

Go back to Magnesium Binding Sites List in 8c8i
Magnesium binding site 1 out of 1 in the Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg201

b:77.0
occ:1.00
OD2 C:ASP95 2.5 78.6 1.0
OD2 A:ASP95 2.9 67.5 1.0
OD2 B:ASP95 3.3 82.2 1.0
CG C:ASP95 3.6 70.1 1.0
OD1 C:ASP95 4.0 70.3 1.0
CG A:ASP95 4.1 54.0 1.0
CG B:ASP95 4.3 74.6 1.0
O A:VAL96 4.6 44.3 1.0
OD1 B:ASP95 4.6 67.4 1.0
OD1 A:ASP95 4.6 53.0 1.0
O C:VAL96 4.7 40.9 1.0
CB C:ASP95 4.9 64.8 1.0

Reference:

B.K.Kohegyi, K.Nyiri, B.G.Vertessy. Human Dutpase in Complex with A Potent Proteinaceous Inhibitor (Stl) To Be Published.
Page generated: Thu Oct 3 20:11:50 2024

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