Magnesium in PDB 8crj: Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes)

Enzymatic activity of Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes)

All present enzymatic activity of Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes):
6.3.1.20;

Protein crystallography data

The structure of Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes), PDB code: 8crj was solved by J.-N.Dienemann, S.-Y.Chen, M.Hitzenberger, M.L.Sievert, S.M.Hacker, S.T.Prigge, M.Zacharias, M.Groll, S.A.Sieber, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.00 / 2.60
Space group P 41 21 2
Cell size a, b, c (Å), α, β, γ (°) 79.31, 79.31, 225.14, 90, 90, 90
R / Rfree (%) 17.3 / 20.6

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes) (pdb code 8crj). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes), PDB code: 8crj:

Magnesium binding site 1 out of 1 in 8crj

Go back to Magnesium Binding Sites List in 8crj
Magnesium binding site 1 out of 1 in the Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of LPLA1 in Complex with Lipoyl-Amp (Listeria Monocytogenes) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg402

b:86.2
occ:1.00
O A:ILE206 3.8 77.9 1.0
O A:TYR205 4.3 79.5 1.0
O A:HOH523 4.3 71.2 1.0
N A:GLY208 4.5 87.6 1.0
CA A:GLY208 4.5 88.3 1.0
C A:ILE206 4.6 76.5 1.0
C A:PHE207 4.8 82.9 1.0
O A:HOH534 4.9 67.7 1.0

Reference:

J.N.Dienemann, S.Y.Chen, M.Hitzenberger, M.L.Sievert, S.M.Hacker, S.T.Prigge, M.Zacharias, M.Groll, S.A.Sieber. A Chemical Proteomic Strategy Reveals Inhibitors of Lipoate Salvage in Bacteria and Parasites. Angew.Chem.Int.Ed.Engl. 04533 2023.
ISSN: ESSN 1521-3773
PubMed: 37249408
DOI: 10.1002/ANIE.202304533
Page generated: Thu Oct 3 22:51:36 2024

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