Magnesium in PDB 8f18: Apo KIF20A[1-565] Class-2 in Complex with A Microtubule

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Apo KIF20A[1-565] Class-2 in Complex with A Microtubule (pdb code 8f18). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Apo KIF20A[1-565] Class-2 in Complex with A Microtubule, PDB code: 8f18:

Magnesium binding site 1 out of 1 in 8f18

Go back to Magnesium Binding Sites List in 8f18
Magnesium binding site 1 out of 1 in the Apo KIF20A[1-565] Class-2 in Complex with A Microtubule


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Apo KIF20A[1-565] Class-2 in Complex with A Microtubule within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg501

b:34.9
occ:1.00
O1G A:GTP502 1.9 27.7 1.0
OE1 A:GLU71 2.1 31.8 1.0
OD2 A:ASP98 2.3 35.5 1.0
PG A:GTP502 2.5 27.7 1.0
O3G A:GTP502 2.7 27.7 1.0
O2G A:GTP502 2.9 27.7 1.0
CD A:GLU71 3.0 31.8 1.0
CG A:ASP98 3.2 35.5 1.0
OD1 A:ASP98 3.4 35.5 1.0
CB A:GLU71 3.7 31.8 1.0
OE2 A:GLU71 3.8 31.8 1.0
CG A:GLU71 4.0 31.8 1.0
O3B A:GTP502 4.1 27.7 1.0
NZ B:LYS252 4.2 27.6 1.0
O A:ASP69 4.5 31.2 1.0
O1B A:GTP502 4.6 27.7 1.0
O3A A:GTP502 4.6 27.7 1.0
CB A:ASP98 4.6 35.5 1.0
CE B:LYS252 4.7 27.6 1.0
PB A:GTP502 4.7 27.7 1.0

Reference:

F.M.Ranaivoson, V.Crozet, M.P.M.H.Benoit, A.A.Mohammed Khalid, C.Kikuti, M.E.Sirkia, A.El Marjou, A.B.Asenjo, H.Sosa, C.F.Schmidt, S.S.Rosenfeld, A.Houdusse. Nucleotide-Free Structures of KIF20A Illuminate Atypical Mechanochemistry in This Kinesin-6 To Be Published.
Page generated: Fri Oct 4 01:35:54 2024

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