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Magnesium in PDB 8f8f: The Structure of RV2173 From M. Tuberculosis (Apo Form)

Enzymatic activity of The Structure of RV2173 From M. Tuberculosis (Apo Form)

All present enzymatic activity of The Structure of RV2173 From M. Tuberculosis (Apo Form):
2.5.1.1; 2.5.1.10;

Protein crystallography data

The structure of The Structure of RV2173 From M. Tuberculosis (Apo Form), PDB code: 8f8f was solved by J.M.Johnston, T.M.Allison, J.Titterington, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 19.76 / 2.00
Space group P 21 21 2
Cell size a, b, c (Å), α, β, γ (°) 81.797, 190.713, 66.48, 90, 90, 90
R / Rfree (%) 21.2 / 23.8

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Structure of RV2173 From M. Tuberculosis (Apo Form) (pdb code 8f8f). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Structure of RV2173 From M. Tuberculosis (Apo Form), PDB code: 8f8f:

Magnesium binding site 1 out of 1 in 8f8f

Go back to Magnesium Binding Sites List in 8f8f
Magnesium binding site 1 out of 1 in the The Structure of RV2173 From M. Tuberculosis (Apo Form)


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Structure of RV2173 From M. Tuberculosis (Apo Form) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg405

b:53.3
occ:1.00
OG A:SER140 2.0 45.9 1.0
OG B:SER140 2.0 47.8 1.0
O A:HOH507 2.3 35.5 1.0
O B:HOH508 2.4 37.0 1.0
CB A:SER140 3.3 41.0 1.0
CB B:SER140 3.3 42.5 1.0
O B:HOH618 3.6 49.0 1.0
OD2 B:ASP136 3.7 42.6 0.6
O A:HOH606 3.7 42.2 1.0
CA A:SER140 3.8 38.8 1.0
O B:HOH614 3.9 55.1 1.0
CA B:SER140 3.9 40.3 1.0
OD2 A:ASP136 4.0 43.1 0.4
O A:HOH503 4.0 34.5 1.0
O B:HOH511 4.1 34.0 1.0
N A:SER140 4.1 31.4 1.0
OD1 A:ASP136 4.3 35.5 0.4
OD1 B:ASP136 4.3 34.8 0.6
N B:SER140 4.3 36.2 1.0
CG B:ASP136 4.4 34.9 0.6
O A:HOH535 4.4 53.3 1.0
CG A:ASP136 4.5 30.9 0.4
O A:ASP136 4.7 40.2 1.0
O B:ASP136 4.8 37.2 1.0
C A:VAL139 5.0 44.1 1.0

Reference:

J.M.Johnston, T.M.Allison, J.Titterington, C.P.H.Beasley. The Structure of RV2173 From M. Tuberculosis in Apo-, Ipp-, and Dmap-Bound Forms. To Be Published.
Page generated: Thu Dec 28 09:02:26 2023

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