Magnesium in PDB 8fi2: Structure of Lettuce C20T Bound to Dfhbi-1T

The structure of Structure of Lettuce C20T Bound to Dfhbi-1T, PDB code: 8fi2 was solved by L.F.M.Passalacqua, A.R.Ferre-D'amare, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.73 / 3.00
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	24.841, 44.565, 119.59, 90, 90, 90
R / Rfree (%)	24.4 / 28.7

The structure of Structure of Lettuce C20T Bound to Dfhbi-1T also contains other interesting chemical elements:

Fluorine	(F)	5 atoms
Potassium	(K)	2 atoms

The binding sites of Magnesium atom in the Structure of Lettuce C20T Bound to Dfhbi-1T (pdb code 8fi2). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Structure of Lettuce C20T Bound to Dfhbi-1T, PDB code: 8fi2:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg103 b:51.6 occ:1.00 O A:HOH207 2.1 48.0 1.0 OP2 A:DA52 2.4 47.4 1.0 O A:HOH204 2.6 50.4 1.0 P A:DA52 3.4 46.5 1.0 O5' A:DA52 3.5 60.9 1.0 OP1 A:DA52 4.0 48.3 1.0 O3' A:DA51 4.8 51.0 1.0 C2' A:DA52 4.9 47.8 1.0 C5' A:DA52 4.9 52.1 1.0 C2' A:DA51 5.0 56.2 1.0 C3' A:DA52 5.0 49.2 1.0

Magnesium binding site 2 out of 3 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg104 b:47.3 occ:1.00 O A:HOH208 2.0 51.1 1.0 OP2 A:DT15 2.0 68.9 1.0 O A:HOH203 2.0 46.9 1.0 O A:HOH202 2.1 46.6 1.0 O A:HOH201 2.2 60.8 1.0 N7 A:DG13 2.7 45.5 1.0 P A:DT15 3.3 60.1 1.0 C8 A:DG13 3.4 41.8 1.0 OP2 A:DG13 3.7 46.9 1.0 C5 A:DG13 3.8 41.4 1.0 OP1 A:DT15 3.9 54.8 1.0 O5' A:DT15 4.0 57.9 1.0 O6 A:DG13 4.1 43.8 1.0 OP2 A:DT12 4.1 50.0 1.0 C6 A:DG13 4.4 41.9 1.0 O3' A:DA14 4.5 60.5 1.0 N9 A:DG13 4.7 42.0 1.0 C3' A:DA14 4.7 54.3 1.0 O5' A:DT12 4.8 54.9 1.0 O5' A:DG13 4.8 49.6 1.0 P A:DG13 4.9 58.2 1.0 C4 A:DG13 4.9 39.8 1.0 P A:DT12 4.9 49.0 1.0

Magnesium binding site 3 out of 3 in the Structure of Lettuce C20T Bound to Dfhbi-1T


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of Lettuce C20T Bound to Dfhbi-1T within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg105 b:52.5 occ:1.00 OP2 A:DT20 2.1 71.2 1.0 O A:HOH205 2.8 45.1 1.0 P A:DT20 3.4 62.1 1.0 O3' A:DG19 3.8 46.7 1.0 N7 A:DA21 3.9 45.4 1.0 O5' A:DT20 4.0 44.5 1.0 O6 A:DG22 4.1 47.2 1.0 C2' A:DG19 4.4 53.8 1.0 C3' A:DG19 4.4 53.2 1.0 OP1 A:DT20 4.7 58.2 1.0 N6 A:DA21 4.7 34.4 1.0 C8 A:DA21 4.8 39.0 1.0 OP2 A:DA7 4.9 51.8 0.5 C5 A:DA21 4.9 40.2 1.0

L.F.M.Passalacqua, A.R.Ferre-D'amare. Structure of Lettuce C20T Bound to Dfhbi-1T To Be Published.