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Magnesium in PDB 8gxn: The Crystal Structure of CSFAOMT2 in Complex with Sah

Protein crystallography data

The structure of The Crystal Structure of CSFAOMT2 in Complex with Sah, PDB code: 8gxn was solved by Z.M.Zhang, Y.E.Zhou, H.S.Huang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.06 / 1.34
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 74.688, 74.688, 81.523, 90, 90, 120
R / Rfree (%) 16.4 / 17.1

Magnesium Binding Sites:

The binding sites of Magnesium atom in the The Crystal Structure of CSFAOMT2 in Complex with Sah (pdb code 8gxn). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Crystal Structure of CSFAOMT2 in Complex with Sah, PDB code: 8gxn:

Magnesium binding site 1 out of 1 in 8gxn

Go back to Magnesium Binding Sites List in 8gxn
Magnesium binding site 1 out of 1 in the The Crystal Structure of CSFAOMT2 in Complex with Sah


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Crystal Structure of CSFAOMT2 in Complex with Sah within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:31.6
occ:1.00
OD1 B:ASP153 2.6 22.3 1.0
OD1 B:ASN180 2.9 20.9 1.0
O B:ALA154 2.9 19.8 1.0
O B:HOH525 3.0 36.4 1.0
HH B:TYR159 3.3 19.9 1.0
OH B:TYR159 3.3 16.6 1.0
H5'2 B:SAH301 3.4 28.3 1.0
H B:ALA154 3.5 22.2 1.0
N B:ALA154 3.6 18.5 1.0
HD21 B:ASN180 3.6 24.5 1.0
H5'1 B:SAH301 3.7 28.3 1.0
CG B:ASN180 3.7 20.5 1.0
CG B:ASP153 3.7 19.8 1.0
O B:HOH578 3.8 45.2 1.0
C B:ASP153 3.8 16.8 1.0
C B:ALA154 3.9 17.4 1.0
HA B:ASP153 3.9 18.2 1.0
C5' B:SAH301 4.0 23.6 1.0
ND2 B:ASN180 4.0 20.4 1.0
HG3 B:LYS156 4.0 21.4 1.0
CA B:ALA154 4.1 17.2 1.0
HA B:ALA154 4.2 20.6 1.0
CA B:ASP153 4.3 15.1 1.0
O B:ASP153 4.3 18.2 1.0
HG2 B:LYS156 4.3 21.4 1.0
SD B:SAH301 4.4 24.5 1.0
HD3 B:LYS156 4.5 24.6 1.0
HG2 B:SAH301 4.5 26.1 1.0
OD2 B:ASP153 4.5 27.2 1.0
CZ B:TYR159 4.6 15.6 1.0
CG B:LYS156 4.6 17.8 1.0
CB B:ASP153 4.6 18.3 1.0
HD22 B:ASN180 4.8 24.5 1.0
CB B:ASN180 5.0 17.3 1.0
HE1 B:TYR159 5.0 18.0 1.0

Reference:

Z.M.Zhang, Y.E.Zhou, H.S.Huang. Structure of Two O-Methyltransferases Involved in Synthesis of O-Methylated Catechins in Tea Plants To Be Published.
Page generated: Thu Dec 28 09:06:35 2023

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