Magnesium in PDB 8hh3: F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp

All present enzymatic activity of F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp:
7.1.2.2;

The binding sites of Magnesium atom in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp (pdb code 8hh3). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp, PDB code: 8hh3:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:70.2 occ:1.00 O1G A:ATP600 2.1 71.3 1.0 OG1 A:THR176 2.1 63.5 1.0 O1B A:ATP600 2.5 71.3 1.0 PG A:ATP600 3.3 71.3 1.0 CB A:THR176 3.4 63.5 1.0 PB A:ATP600 3.6 71.3 1.0 O3B A:ATP600 3.7 71.3 1.0 O2A A:ATP600 4.0 71.3 1.0 CG2 A:THR176 4.0 63.5 1.0 OD2 A:ASP261 4.2 61.5 1.0 O3G A:ATP600 4.2 71.3 1.0 OD1 A:ASP261 4.3 61.5 1.0 CA A:THR176 4.5 63.5 1.0 O2G A:ATP600 4.5 71.3 1.0 N A:THR176 4.5 63.5 1.0 O3A A:ATP600 4.6 71.3 1.0 CG A:ASP261 4.7 61.5 1.0 O2B A:ATP600 4.7 71.3 1.0 NE2 A:GLN200 4.8 58.2 1.0 PA A:ATP600 4.9 71.3 1.0

Magnesium binding site 2 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:62.5 occ:1.00 O2G B:ATP600 2.0 64.9 1.0 OG1 B:THR176 2.0 56.9 1.0 O2B B:ATP600 2.3 64.9 1.0 CB B:THR176 3.2 56.9 1.0 PG B:ATP600 3.3 64.9 1.0 O2A B:ATP600 3.5 64.9 1.0 PB B:ATP600 3.5 64.9 1.0 O3B B:ATP600 3.6 64.9 1.0 CG2 B:THR176 3.9 56.9 1.0 O3G B:ATP600 4.2 64.9 1.0 CA B:THR176 4.4 56.9 1.0 O1G B:ATP600 4.4 64.9 1.0 N B:THR176 4.4 56.9 1.0 O3A B:ATP600 4.4 64.9 1.0 OE1 B:GLN200 4.4 57.7 1.0 OD2 B:ASP261 4.6 53.6 1.0 PA B:ATP600 4.6 64.9 1.0 O1B B:ATP600 4.7 64.9 1.0

Magnesium binding site 3 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:61.1 occ:1.00 OG1 C:THR176 2.0 60.7 1.0 O1G C:ATP602 2.0 64.8 1.0 O2B C:ATP602 2.6 64.8 1.0 CB C:THR176 3.2 60.7 1.0 PG C:ATP602 3.2 64.8 1.0 O3B C:ATP602 3.3 64.8 1.0 PB C:ATP602 3.6 64.8 1.0 CG2 C:THR176 3.9 60.7 1.0 O2A C:ATP602 4.1 64.8 1.0 O2G C:ATP602 4.2 64.8 1.0 O3G C:ATP602 4.3 64.8 1.0 CA C:THR176 4.3 60.7 1.0 N C:THR176 4.4 60.7 1.0 O3A C:ATP602 4.4 64.8 1.0 PA C:ATP602 4.7 64.8 1.0 O1A C:ATP602 4.8 64.8 1.0 O1B C:ATP602 4.8 64.8 1.0 OD2 C:ASP261 4.8 59.9 1.0 NE2 C:GLN200 4.8 58.1 1.0 OD1 C:ASP261 4.9 59.9 1.0

Magnesium binding site 4 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:80.5 occ:1.00 OG1 D:THR165 1.7 73.7 1.0 O1B D:ADP503 2.1 78.0 1.0 CB D:THR165 3.1 73.7 1.0 O3 D:PO4501 3.1 85.8 1.0 PB D:ADP503 3.3 78.0 1.0 O2B D:ADP503 3.7 78.0 1.0 N D:THR165 3.8 73.7 1.0 CG2 D:THR165 4.0 73.7 1.0 CA D:THR165 4.0 73.7 1.0 NH1 D:ARG191 4.0 68.1 1.0 O1A D:ADP503 4.1 78.0 1.0 OE1 D:GLU194 4.2 70.0 1.0 OE2 D:GLU194 4.3 70.0 1.0 O3B D:ADP503 4.3 78.0 1.0 O3A D:ADP503 4.4 78.0 1.0 OE1 D:GLU190 4.4 68.5 1.0 PA D:ADP503 4.5 78.0 1.0 O2A D:ADP503 4.5 78.0 1.0 P D:PO4501 4.5 85.8 1.0 CD D:GLU194 4.6 70.0 1.0 O4 D:PO4501 4.7 85.8 1.0 C D:LYS164 4.9 72.5 1.0 CB D:LYS164 5.0 72.5 1.0 NZ D:LYS164 5.0 72.5 1.0

Magnesium binding site 5 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F1 Domain of FOF1-Atpase From Bacillus PS3,90 Degrees,Highatp within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:55.8 occ:1.00 OG1 F:THR165 2.0 53.3 1.0 O3G F:ATP602 2.1 57.1 1.0 O2B F:ATP602 2.2 57.1 1.0 OE2 F:GLU190 2.8 56.5 1.0 CB F:THR165 3.4 53.3 1.0 PG F:ATP602 3.4 57.1 1.0 PB F:ATP602 3.5 57.1 1.0 O3B F:ATP602 3.6 57.1 1.0 NH1 F:ARG191 3.8 54.5 1.0 OE1 F:GLU194 3.8 59.3 1.0 CD F:GLU190 3.9 56.5 1.0 OE2 F:GLU194 4.0 59.3 1.0 CG2 F:THR165 4.1 53.3 1.0 O2G F:ATP602 4.2 57.1 1.0 N F:THR165 4.3 53.3 1.0 CA F:THR165 4.3 53.3 1.0 CD F:GLU194 4.3 59.3 1.0 O1A F:ATP602 4.4 57.1 1.0 CG F:GLU190 4.4 56.5 1.0 O3A F:ATP602 4.5 57.1 1.0 O1G F:ATP602 4.5 57.1 1.0 O1B F:ATP602 4.5 57.1 1.0 PA F:ATP602 4.8 57.1 1.0 NH1 B:ARG365 4.9 55.3 1.0 OD1 F:ASP252 4.9 54.3 1.0 OE1 F:GLU190 4.9 56.5 1.0

A.Nakano, K.Yokoyama, J.Kishikawa, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.