Magnesium in PDB 8hh7: F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp

All present enzymatic activity of F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp:
7.1.2.2;

The binding sites of Magnesium atom in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp (pdb code 8hh7). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp, PDB code: 8hh7:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:59.6 occ:1.00 O1G A:ATP600 2.0 62.3 1.0 OG1 A:THR176 2.0 55.3 1.0 O1B A:ATP600 2.2 62.3 1.0 PG A:ATP600 3.2 62.3 1.0 CB A:THR176 3.2 55.3 1.0 PB A:ATP600 3.3 62.3 1.0 O3B A:ATP600 3.4 62.3 1.0 O2A A:ATP600 3.6 62.3 1.0 CG2 A:THR176 4.1 55.3 1.0 O3G A:ATP600 4.1 62.3 1.0 N A:THR176 4.1 55.3 1.0 O3A A:ATP600 4.2 62.3 1.0 CA A:THR176 4.2 55.3 1.0 O2G A:ATP600 4.3 62.3 1.0 O2B A:ATP600 4.5 62.3 1.0 PA A:ATP600 4.6 62.3 1.0 OD1 A:ASP261 4.6 57.4 1.0 OD2 A:ASP261 4.8 57.4 1.0

Magnesium binding site 2 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:81.7 occ:1.00 OG1 B:THR176 2.0 70.4 1.0 O2G B:ATP600 2.2 88.5 1.0 O2B B:ATP600 2.3 88.5 1.0 PG B:ATP600 3.1 88.5 1.0 O3B B:ATP600 3.3 88.5 1.0 CB B:THR176 3.3 70.4 1.0 PB B:ATP600 3.4 88.5 1.0 O1G B:ATP600 3.5 88.5 1.0 O2A B:ATP600 3.7 88.5 1.0 OD2 B:ASP261 4.1 59.8 1.0 CG2 B:THR176 4.1 70.4 1.0 OE1 B:GLN200 4.1 58.2 1.0 N B:THR176 4.3 70.4 1.0 O3A B:ATP600 4.4 88.5 1.0 CA B:THR176 4.4 70.4 1.0 OD1 B:ASP261 4.4 59.8 1.0 O1B B:ATP600 4.5 88.5 1.0 O3G B:ATP600 4.5 88.5 1.0 CG B:ASP261 4.7 59.8 1.0 PA B:ATP600 4.7 88.5 1.0

Magnesium binding site 3 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:72.7 occ:1.00 O2B C:ATP600 2.0 77.2 1.0 O1G C:ATP600 2.1 77.2 1.0 OG1 C:THR176 2.1 64.7 1.0 PG C:ATP600 3.1 77.2 1.0 PB C:ATP600 3.2 77.2 1.0 O3B C:ATP600 3.2 77.2 1.0 CB C:THR176 3.5 64.7 1.0 O3G C:ATP600 4.0 77.2 1.0 O1B C:ATP600 4.1 77.2 1.0 N C:THR176 4.1 64.7 1.0 OD2 C:ASP261 4.3 61.0 1.0 O3A C:ATP600 4.3 77.2 1.0 O2G C:ATP600 4.3 77.2 1.0 CA C:THR176 4.4 64.7 1.0 CG2 C:THR176 4.4 64.7 1.0 O2A C:ATP600 4.5 77.2 1.0 PA C:ATP600 4.8 77.2 1.0 CB C:LYS175 4.9 64.1 1.0 NZ C:LYS175 5.0 64.1 1.0 CE C:LYS175 5.0 64.1 1.0 O1A C:ATP600 5.0 77.2 1.0

Magnesium binding site 4 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:59.8 occ:1.00 O2B D:ADP501 2.0 54.1 1.0 OG1 D:THR165 2.1 52.4 1.0 PB D:ADP501 3.4 54.1 1.0 CB D:THR165 3.4 52.4 1.0 OE1 D:GLU190 3.4 59.4 1.0 O3B D:ADP501 3.8 54.1 1.0 NH1 D:ARG191 3.9 56.3 1.0 O3 D:PO4503 4.0 20.0 1.0 OE2 D:GLU194 4.0 61.4 1.0 N D:THR165 4.1 52.4 1.0 CA D:THR165 4.3 52.4 1.0 OE1 D:GLU194 4.3 61.4 1.0 CG2 D:THR165 4.3 52.4 1.0 O2A D:ADP501 4.3 54.1 1.0 O1B D:ADP501 4.3 54.1 1.0 CD D:GLU190 4.4 59.4 1.0 O3A D:ADP501 4.4 54.1 1.0 CD D:GLU194 4.6 61.4 1.0 PA D:ADP501 4.7 54.1 1.0 O1 D:PO4503 4.8 20.0 1.0 O1A D:ADP501 4.9 54.1 1.0 P D:PO4503 4.9 20.0 1.0 OE2 D:GLU190 4.9 59.4 1.0

Magnesium binding site 5 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F1 Domain of FOF1-Atpase From Bacillus PS3, 81 Degrees, Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:60.9 occ:1.00 OG1 F:THR165 2.0 56.7 1.0 O3G F:ATP602 2.0 61.1 1.0 O2B F:ATP602 2.2 61.1 1.0 OE1 F:GLU190 3.1 60.2 1.0 CB F:THR165 3.3 56.7 1.0 PG F:ATP602 3.4 61.1 1.0 PB F:ATP602 3.5 61.1 1.0 O3B F:ATP602 3.5 61.1 1.0 CD F:GLU190 4.0 60.2 1.0 N F:THR165 4.1 56.7 1.0 NH1 F:ARG191 4.1 58.1 1.0 CA F:THR165 4.2 56.7 1.0 CG2 F:THR165 4.2 56.7 1.0 O1G F:ATP602 4.2 61.1 1.0 OE2 F:GLU194 4.3 63.2 1.0 OE1 F:GLU194 4.3 63.2 1.0 O2G F:ATP602 4.4 61.1 1.0 O1B F:ATP602 4.5 61.1 1.0 O3A F:ATP602 4.5 61.1 1.0 OE2 F:GLU190 4.5 60.2 1.0 O1A F:ATP602 4.6 61.1 1.0 CD F:GLU194 4.7 63.2 1.0 CE F:LYS164 4.9 54.1 1.0 PA F:ATP602 4.9 61.1 1.0 NZ F:LYS164 5.0 54.1 1.0 CB F:LYS164 5.0 54.1 1.0

A.Nakano, K.Yokoyama, J.Kishikawa, A.Nakanishi, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.