Magnesium in PDB 8hh8: F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp

All present enzymatic activity of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp:
7.1.2.2;

The binding sites of Magnesium atom in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp (pdb code 8hh8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp, PDB code: 8hh8:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:84.2 occ:1.00 O1B A:ATP600 2.1 88.0 1.0 OG1 A:THR176 2.1 75.4 1.0 O1G A:ATP600 2.5 88.0 1.0 PB A:ATP600 3.3 88.0 1.0 CB A:THR176 3.5 75.4 1.0 PG A:ATP600 3.6 88.0 1.0 O3B A:ATP600 3.6 88.0 1.0 O2A A:ATP600 4.0 88.0 1.0 CG2 A:THR176 4.2 75.4 1.0 O2G A:ATP600 4.3 88.0 1.0 OD2 A:ASP261 4.4 65.2 1.0 O2B A:ATP600 4.4 88.0 1.0 N A:THR176 4.4 75.4 1.0 O3A A:ATP600 4.4 88.0 1.0 CA A:THR176 4.5 75.4 1.0 OD1 A:ASP261 4.6 65.2 1.0 O3G A:ATP600 4.8 88.0 1.0 PA A:ATP600 4.9 88.0 1.0 CG A:ASP261 4.9 65.2 1.0

Magnesium binding site 2 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:83.7 occ:1.00 OG1 B:THR176 2.1 72.9 1.0 O2G B:ATP600 2.1 91.1 1.0 O2B B:ATP600 2.1 91.1 1.0 O3B B:ATP600 3.1 91.1 1.0 PB B:ATP600 3.2 91.1 1.0 PG B:ATP600 3.2 91.1 1.0 CB B:THR176 3.3 72.9 1.0 O2A B:ATP600 3.5 91.1 1.0 O3G B:ATP600 4.1 91.1 1.0 O3A B:ATP600 4.1 91.1 1.0 CG2 B:THR176 4.1 72.9 1.0 N B:THR176 4.2 72.9 1.0 OE1 B:GLN200 4.3 63.7 1.0 O1G B:ATP600 4.3 91.1 1.0 CA B:THR176 4.3 72.9 1.0 O1B B:ATP600 4.3 91.1 1.0 OD2 B:ASP261 4.4 62.5 1.0 PA B:ATP600 4.5 91.1 1.0 OD1 B:ASP261 4.8 62.5 1.0

Magnesium binding site 3 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:76.2 occ:1.00 O1G C:ATP600 2.0 77.4 1.0 OG1 C:THR176 2.0 68.2 1.0 O2B C:ATP600 2.1 77.4 1.0 PG C:ATP600 3.0 77.4 1.0 O3B C:ATP600 3.1 77.4 1.0 PB C:ATP600 3.2 77.4 1.0 CB C:THR176 3.3 68.2 1.0 O3G C:ATP600 3.7 77.4 1.0 N C:THR176 4.0 68.2 1.0 O1B C:ATP600 4.2 77.4 1.0 CG2 C:THR176 4.2 68.2 1.0 CA C:THR176 4.3 68.2 1.0 O3A C:ATP600 4.3 77.4 1.0 O2G C:ATP600 4.3 77.4 1.0 O2A C:ATP600 4.4 77.4 1.0 PA C:ATP600 4.8 77.4 1.0 OD1 C:ASP261 4.8 62.4 1.0 O1A C:ATP600 4.8 77.4 1.0

Magnesium binding site 4 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg601 b:70.0 occ:1.00 O2B D:ADP602 2.1 66.8 1.0 OG1 D:THR165 2.2 63.0 1.0 O2 D:PO4603 2.4 80.0 1.0 CB D:THR165 3.4 63.0 1.0 PB D:ADP602 3.4 66.8 1.0 NH1 D:ARG191 3.7 66.5 1.0 OE2 D:GLU194 3.8 71.5 1.0 OE1 D:GLU194 3.9 71.5 1.0 P D:PO4603 3.9 80.0 1.0 O3B D:ADP602 3.9 66.8 1.0 O2A D:ADP602 4.1 66.8 1.0 CD D:GLU194 4.2 71.5 1.0 OE1 D:GLU190 4.3 68.8 1.0 CG2 D:THR165 4.3 63.0 1.0 O1B D:ADP602 4.4 66.8 1.0 O4 D:PO4603 4.4 80.0 1.0 N D:THR165 4.4 63.0 1.0 O3A D:ADP602 4.4 66.8 1.0 CA D:THR165 4.4 63.0 1.0 PA D:ADP602 4.6 66.8 1.0 ND2 D:ASN253 4.6 63.4 1.0 O3 D:PO4603 4.6 80.0 1.0 O1A D:ADP602 4.7 66.8 1.0 CD D:GLU190 4.7 68.8 1.0 O1 D:PO4603 4.8 80.0 1.0 CZ D:ARG191 4.9 66.5 1.0

Magnesium binding site 5 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:64.2 occ:1.00 O3G F:ATP602 2.0 65.2 1.0 OG1 F:THR165 2.0 60.8 1.0 O2B F:ATP602 2.8 65.2 1.0 PG F:ATP602 3.4 65.2 1.0 CB F:THR165 3.4 60.8 1.0 OE1 F:GLU190 3.6 67.2 1.0 O3B F:ATP602 3.9 65.2 1.0 PB F:ATP602 3.9 65.2 1.0 NH1 F:ARG191 4.0 63.4 1.0 O1G F:ATP602 4.1 65.2 1.0 OE1 F:GLU194 4.1 67.4 1.0 OE2 F:GLU194 4.1 67.4 1.0 CD F:GLU190 4.2 67.2 1.0 CG2 F:THR165 4.2 60.8 1.0 N F:THR165 4.2 60.8 1.0 CA F:THR165 4.3 60.8 1.0 O2G F:ATP602 4.5 65.2 1.0 CD F:GLU194 4.5 67.4 1.0 OE2 F:GLU190 4.7 67.2 1.0 OD1 F:ASP252 4.7 65.8 1.0 CG F:GLU190 4.9 67.2 1.0 O3A F:ATP602 4.9 65.2 1.0 O1B F:ATP602 4.9 65.2 1.0 O1A F:ATP602 4.9 65.2 1.0

A.Nakano, K.Yokoyama, J.Kishikawa, A.Nakanishi, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.