Magnesium in PDB 8hha: F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp

All present enzymatic activity of F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp:
7.1.2.2;

The binding sites of Magnesium atom in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp (pdb code 8hha). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp, PDB code: 8hha:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:77.2 occ:1.00 O1G A:ATP600 2.1 95.8 1.0 OG1 A:THR176 2.3 78.0 1.0 OE1 A:GLN200 3.2 61.2 1.0 OD1 A:ASP261 3.3 61.4 1.0 PG A:ATP600 3.4 95.8 1.0 OD2 A:ASP261 3.5 61.4 1.0 CB A:THR176 3.6 78.0 1.0 CG A:ASP261 3.8 61.4 1.0 CG2 A:THR176 3.9 78.0 1.0 O2G A:ATP600 3.9 95.8 1.0 CD A:GLN200 3.9 61.2 1.0 O1B A:ATP600 4.4 95.8 1.0 O3G A:ATP600 4.4 95.8 1.0 O3B A:ATP600 4.5 95.8 1.0 CG A:GLN200 4.5 61.2 1.0 CA A:THR176 4.6 78.0 1.0 O2A A:ATP600 4.7 95.8 1.0 NE2 A:GLN200 4.8 61.2 1.0 N A:THR176 4.8 78.0 1.0 OH A:TYR195 4.8 50.8 1.0

Magnesium binding site 2 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:91.2 occ:1.00 O2G B:ATP600 2.4 94.8 1.0 NE2 B:GLN200 2.8 58.9 1.0 OG1 B:THR176 3.0 73.2 1.0 O2B B:ATP600 3.6 94.8 1.0 PG B:ATP600 3.7 94.8 1.0 O3B B:ATP600 3.8 94.8 1.0 CB B:THR176 4.0 73.2 1.0 CD B:GLN200 4.1 58.9 1.0 O2A B:ATP600 4.2 94.8 1.0 PB B:ATP600 4.3 94.8 1.0 CG2 B:THR204 4.5 56.6 1.0 CG2 B:THR176 4.5 73.2 1.0 OE1 B:GLN200 4.6 58.9 1.0 O3G B:ATP600 4.6 94.8 1.0 O1G B:ATP600 4.7 94.8 1.0 O3A B:ATP600 4.9 94.8 1.0

Magnesium binding site 3 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:58.3 occ:1.00 O1G C:ATP602 2.0 62.1 1.0 O2B C:ATP602 2.0 62.1 1.0 OG1 C:THR176 2.1 55.6 1.0 PG C:ATP602 2.7 62.1 1.0 O3B C:ATP602 2.8 62.1 1.0 PB C:ATP602 3.0 62.1 1.0 O3G C:ATP602 3.1 62.1 1.0 CB C:THR176 3.4 55.6 1.0 O1B C:ATP602 4.0 62.1 1.0 N C:THR176 4.0 55.6 1.0 O3A C:ATP602 4.1 62.1 1.0 O2G C:ATP602 4.2 62.1 1.0 CA C:THR176 4.2 55.6 1.0 O2A C:ATP602 4.3 62.1 1.0 CG2 C:THR176 4.4 55.6 1.0 PA C:ATP602 4.6 62.1 1.0 O1A C:ATP602 4.8 62.1 1.0 NZ C:LYS175 4.9 54.2 1.0 NE2 C:GLN200 4.9 53.4 1.0 CB C:LYS175 5.0 54.2 1.0

Magnesium binding site 4 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg601 b:66.9 occ:1.00 O4 D:PO4602 2.0 67.0 1.0 O3B D:ADP603 2.1 65.7 1.0 OG1 D:THR165 2.4 61.2 1.0 O3 D:PO4602 2.6 67.0 1.0 P D:PO4602 2.7 67.0 1.0 PB D:ADP603 3.1 65.7 1.0 O2B D:ADP603 3.3 65.7 1.0 O2 D:PO4602 3.5 67.0 1.0 CB D:THR165 3.8 61.2 1.0 O1 D:PO4602 4.0 67.0 1.0 O1B D:ADP603 4.0 65.7 1.0 N D:THR165 4.1 61.2 1.0 O2A D:ADP603 4.3 65.7 1.0 O3A D:ADP603 4.4 65.7 1.0 CA D:THR165 4.5 61.2 1.0 OD1 D:ASP252 4.5 55.9 1.0 CB D:LYS164 4.6 59.4 1.0 NZ D:LYS164 4.7 59.4 1.0 CE D:LYS164 4.7 59.4 1.0 NH1 D:ARG191 4.7 58.4 1.0 CG2 D:THR165 4.8 61.2 1.0 OE1 D:GLU194 4.8 62.7 1.0 PA D:ADP603 4.9 65.7 1.0 C D:LYS164 5.0 59.4 1.0

Magnesium binding site 5 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F1 Domain of FOF1-Atpase From Bacillus PS3,120 Degrees,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:57.4 occ:1.00 OG1 F:THR165 2.1 53.6 1.0 OE1 F:GLU190 2.1 58.3 1.0 O3G F:ATP602 2.2 62.0 1.0 OE2 F:GLU194 2.9 62.4 1.0 NH1 F:ARG191 3.2 57.9 1.0 CB F:THR165 3.3 53.6 1.0 CD F:GLU190 3.3 58.3 1.0 OE1 F:GLU194 3.4 62.4 1.0 O2B F:ATP602 3.4 62.0 1.0 CD F:GLU194 3.5 62.4 1.0 CG2 F:THR165 3.6 53.6 1.0 PG F:ATP602 3.7 62.0 1.0 OE2 F:GLU190 4.0 58.3 1.0 CG F:GLU190 4.4 58.3 1.0 CA F:THR165 4.5 53.6 1.0 CZ F:ARG191 4.5 57.9 1.0 O3B F:ATP602 4.5 62.0 1.0 O2G F:ATP602 4.5 62.0 1.0 O1G F:ATP602 4.5 62.0 1.0 PB F:ATP602 4.6 62.0 1.0 OD1 F:ASP252 4.6 54.3 1.0 N F:THR165 4.8 53.6 1.0 CB F:GLU190 4.9 58.3 1.0 NH1 B:ARG365 5.0 65.4 1.0

A.Nakano, K.Yokoyama, J.Kishikawa, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.