Magnesium in PDB 8hhb: F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp

All present enzymatic activity of F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp:
7.1.2.2;

The binding sites of Magnesium atom in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp (pdb code 8hhb). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp, PDB code: 8hhb:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:86.4 occ:1.00 O1G A:ATP600 2.1 105.3 1.0 OG1 A:THR176 2.1 86.7 1.0 CB A:THR176 3.3 86.7 1.0 OD2 A:ASP261 3.5 74.4 1.0 PG A:ATP600 3.5 105.3 1.0 CG2 A:THR176 3.5 86.7 1.0 OE1 A:GLN200 3.6 76.4 1.0 OD1 A:ASP261 4.2 74.4 1.0 O2G A:ATP600 4.2 105.3 1.0 CG A:ASP261 4.2 74.4 1.0 O1B A:ATP600 4.3 105.3 1.0 O3B A:ATP600 4.3 105.3 1.0 O2A A:ATP600 4.3 105.3 1.0 CA A:THR176 4.5 86.7 1.0 O3G A:ATP600 4.5 105.3 1.0 CD A:GLN200 4.6 76.4 1.0 CG2 A:THR204 4.6 75.5 1.0 OH A:TYR195 4.6 59.9 1.0 CG A:GLN200 4.8 76.4 1.0 N A:THR176 4.8 86.7 1.0 PB A:ATP600 4.9 105.3 1.0

Magnesium binding site 2 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:86.8 occ:1.00 O2G B:ATP600 2.2 110.4 1.0 OG1 B:THR176 2.5 87.8 1.0 NE2 B:GLN200 3.0 71.1 1.0 O2B B:ATP600 3.3 110.4 1.0 PG B:ATP600 3.6 110.4 1.0 CB B:THR176 3.8 87.8 1.0 CD B:GLN200 4.0 71.1 1.0 OD2 B:ASP261 4.0 69.2 1.0 O3G B:ATP600 4.1 110.4 1.0 O3B B:ATP600 4.2 110.4 1.0 CG2 B:THR176 4.3 87.8 1.0 PB B:ATP600 4.4 110.4 1.0 OE1 B:GLN200 4.5 71.1 1.0 OD1 B:ASP261 4.5 69.2 1.0 CG B:ASP261 4.7 69.2 1.0 O1G B:ATP600 4.8 110.4 1.0 CG2 B:THR204 4.8 68.5 1.0 CA B:THR176 4.9 87.8 1.0 N B:THR176 5.0 87.8 1.0 O2A B:ATP600 5.0 110.4 1.0

Magnesium binding site 3 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:74.9 occ:1.00 O1G C:ATP602 2.0 77.0 1.0 O2B C:ATP602 2.0 77.0 1.0 OG1 C:THR176 2.2 69.0 1.0 PG C:ATP602 3.1 77.0 1.0 PB C:ATP602 3.2 77.0 1.0 O3B C:ATP602 3.2 77.0 1.0 CB C:THR176 3.5 69.0 1.0 O3G C:ATP602 4.0 77.0 1.0 O1B C:ATP602 4.0 77.0 1.0 N C:THR176 4.1 69.0 1.0 O2G C:ATP602 4.3 77.0 1.0 O3A C:ATP602 4.3 77.0 1.0 CA C:THR176 4.3 69.0 1.0 CG2 C:THR176 4.5 69.0 1.0 OD2 C:ASP261 4.8 65.9 1.0 O2A C:ATP602 4.8 77.0 1.0 NE2 C:GLN200 4.8 67.8 1.0 O1A C:ATP602 4.9 77.0 1.0 PA C:ATP602 4.9 77.0 1.0 CB C:LYS175 4.9 68.1 1.0 OD1 C:ASP261 4.9 65.9 1.0 NZ C:LYS175 4.9 68.1 1.0

Magnesium binding site 4 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg601 b:72.5 occ:1.00 O2 D:PO4602 2.0 81.2 1.0 O3B D:ADP603 2.1 72.9 1.0 OG1 D:THR165 2.1 69.1 1.0 PB D:ADP603 3.2 72.9 1.0 P D:PO4602 3.4 81.2 1.0 O2B D:ADP603 3.5 72.9 1.0 CB D:THR165 3.5 69.1 1.0 O2A D:ADP603 4.0 72.9 1.0 N D:THR165 4.0 69.1 1.0 O1B D:ADP603 4.0 72.9 1.0 O1 D:PO4602 4.1 81.2 1.0 OE1 D:GLU194 4.1 73.5 1.0 O3 D:PO4602 4.2 81.2 1.0 NH1 D:ARG191 4.2 69.8 1.0 O4 D:PO4602 4.3 81.2 1.0 CA D:THR165 4.3 69.1 1.0 NZ D:LYS164 4.3 69.4 1.0 O3A D:ADP603 4.4 72.9 1.0 CG2 D:THR165 4.4 69.1 1.0 CE D:LYS164 4.6 69.4 1.0 NH2 D:ARG256 4.6 68.3 1.0 PA D:ADP603 4.7 72.9 1.0 OE2 D:GLU194 4.8 73.5 1.0 CB D:LYS164 4.8 69.4 1.0 CD D:GLU194 4.9 73.5 1.0

Magnesium binding site 5 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F1 Domain of FOF1-Atpase From Bacillus PS3,Step Waiting,Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg502 b:67.9 occ:1.00 O2G F:ATP501 1.9 73.4 1.0 OG1 F:THR165 1.9 66.2 1.0 OE1 F:GLU190 2.4 71.9 1.0 PG F:ATP501 3.1 73.4 1.0 O2B F:ATP501 3.2 73.4 1.0 CB F:THR165 3.2 66.2 1.0 CD F:GLU190 3.4 71.9 1.0 OE1 F:GLU194 3.5 75.6 1.0 O3G F:ATP501 3.5 73.4 1.0 O3B F:ATP501 3.5 73.4 1.0 NH1 F:ARG191 3.7 69.2 1.0 OE2 F:GLU194 3.7 75.6 1.0 CG2 F:THR165 3.8 66.2 1.0 OE2 F:GLU190 4.0 71.9 1.0 CD F:GLU194 4.0 75.6 1.0 PB F:ATP501 4.0 73.4 1.0 CA F:THR165 4.3 66.2 1.0 CG F:GLU190 4.3 71.9 1.0 O1G F:ATP501 4.4 73.4 1.0 N F:THR165 4.5 66.2 1.0 OD1 F:ASP252 4.7 69.0 1.0 NH1 B:ARG365 4.9 74.8 1.0 CZ F:ARG191 5.0 69.2 1.0

A.Nakano, K.Yokoyama, J.Kishikawa, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.