Magnesium in PDB 8hhc: F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp

All present enzymatic activity of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp:
7.1.2.2;

The binding sites of Magnesium atom in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp (pdb code 8hhc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp, PDB code: 8hhc:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:119.2 occ:1.00 O1G A:ATP601 2.0 128.6 1.0 OG1 A:THR176 2.9 108.4 1.0 PG A:ATP601 3.3 128.6 1.0 O2G A:ATP601 3.7 128.6 1.0 O1B A:ATP601 3.8 128.6 1.0 OE1 A:GLN200 4.1 82.3 1.0 O3B A:ATP601 4.2 128.6 1.0 CB A:THR176 4.3 108.4 1.0 OE2 A:GLU320 4.3 101.1 1.0 O3G A:ATP601 4.5 128.6 1.0 O A:ASP261 4.6 81.8 1.0 CD A:GLN200 4.6 82.3 1.0 PB A:ATP601 4.7 128.6 1.0 CE A:LYS175 4.7 105.5 1.0 NZ A:LYS175 4.7 105.5 1.0 N A:THR176 4.8 108.4 1.0 CB A:ASP261 4.9 81.8 1.0 CG2 A:THR176 4.9 108.4 1.0 CA A:THR176 5.0 108.4 1.0 CG A:GLN200 5.0 82.3 1.0 CD2 A:PHE318 5.0 82.9 1.0

Magnesium binding site 2 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg601 b:104.5 occ:1.00 O2B B:ATP600 2.1 105.0 1.0 O2G B:ATP600 2.2 105.0 1.0 OG1 B:THR176 2.2 82.0 1.0 O3B B:ATP600 2.3 105.0 1.0 PG B:ATP600 2.4 105.0 1.0 O1G B:ATP600 2.6 105.0 1.0 PB B:ATP600 2.7 105.0 1.0 O2A B:ATP600 2.8 105.0 1.0 CB B:THR176 3.3 82.0 1.0 O3A B:ATP600 3.4 105.0 1.0 N B:THR176 3.8 82.0 1.0 PA B:ATP600 3.8 105.0 1.0 O3G B:ATP600 3.9 105.0 1.0 O1B B:ATP600 3.9 105.0 1.0 CA B:THR176 4.2 82.0 1.0 CG2 B:THR176 4.4 82.0 1.0 O1A B:ATP600 4.6 105.0 1.0 N B:LYS175 4.8 79.4 1.0 C B:LYS175 4.9 79.4 1.0 OE1 B:GLN200 4.9 67.8 1.0 CB B:LYS175 4.9 79.4 1.0 O5' B:ATP600 4.9 105.0 1.0

Magnesium binding site 3 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg601 b:77.4 occ:1.00 O2B C:ATP600 2.0 81.1 1.0 OG1 C:THR176 2.0 72.7 1.0 O1G C:ATP600 2.0 81.1 1.0 PB C:ATP600 3.1 81.1 1.0 PG C:ATP600 3.2 81.1 1.0 O3B C:ATP600 3.3 81.1 1.0 CB C:THR176 3.3 72.7 1.0 O1B C:ATP600 4.0 81.1 1.0 N C:THR176 4.0 72.7 1.0 O3G C:ATP600 4.2 81.1 1.0 CG2 C:THR176 4.2 72.7 1.0 O2G C:ATP600 4.2 81.1 1.0 CA C:THR176 4.3 72.7 1.0 O3A C:ATP600 4.3 81.1 1.0 O2A C:ATP600 4.5 81.1 1.0 OD2 C:ASP261 4.6 71.0 1.0 NE2 C:GLN200 4.7 72.0 1.0 OD1 C:ASP261 4.7 71.0 1.0 PA C:ATP600 4.9 81.1 1.0 NZ C:LYS175 5.0 72.2 1.0

Magnesium binding site 4 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg502 b:111.3 occ:1.00 OG1 D:THR165 1.8 108.1 1.0 O3B D:ATP501 2.0 117.2 1.0 PG D:ATP501 2.2 117.2 1.0 O3G D:ATP501 2.2 117.2 1.0 O1G D:ATP501 2.4 117.2 1.0 CB D:THR165 3.1 108.1 1.0 PB D:ATP501 3.4 117.2 1.0 O3A D:ATP501 3.6 117.2 1.0 OE2 D:GLU194 3.6 91.5 1.0 O2G D:ATP501 3.6 117.2 1.0 N D:THR165 3.7 108.1 1.0 O1A D:ATP501 3.7 117.2 1.0 CA D:THR165 3.9 108.1 1.0 PA D:ATP501 4.1 117.2 1.0 CG2 D:THR165 4.1 108.1 1.0 O2B D:ATP501 4.1 117.2 1.0 OD2 D:ASP252 4.3 91.3 1.0 O1B D:ATP501 4.4 117.2 1.0 NH1 D:ARG191 4.4 87.8 1.0 OE2 D:GLU190 4.5 93.9 1.0 O2A D:ATP501 4.5 117.2 1.0 OD1 D:ASP252 4.6 91.3 1.0 CD D:GLU194 4.6 91.5 1.0 C D:LYS164 4.7 109.0 1.0 CB D:LYS164 4.8 109.0 1.0 NH1 C:ARG365 4.8 88.5 1.0 OE1 D:GLU194 4.9 91.5 1.0 CG D:ASP252 4.9 91.3 1.0 ND2 D:ASN253 4.9 93.4 1.0 NZ D:LYS164 5.0 109.0 1.0

Magnesium binding site 5 out of 5 in the F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of F1 Domain of FOF1-Atpase From Bacillus PS3,Post-Hyd',Lowatp within 5.0Å range: probe atom residue distance (Å) B Occ F:Mg601 b:71.8 occ:1.00 O3G F:ATP602 1.9 70.0 1.0 OG1 F:THR165 2.0 65.9 1.0 OE2 F:GLU194 2.5 73.8 1.0 OE1 F:GLU190 2.9 71.8 1.0 CB F:THR165 2.9 65.9 1.0 NH1 F:ARG191 3.0 68.4 1.0 PG F:ATP602 3.2 70.0 1.0 CD F:GLU194 3.2 73.8 1.0 OE1 F:GLU194 3.2 73.8 1.0 CG2 F:THR165 3.4 65.9 1.0 O2G F:ATP602 3.5 70.0 1.0 O2B F:ATP602 3.6 70.0 1.0 O3B F:ATP602 3.7 70.0 1.0 CD F:GLU190 4.1 71.8 1.0 O1A F:ATP602 4.1 70.0 1.0 CA F:THR165 4.3 65.9 1.0 PB F:ATP602 4.3 70.0 1.0 CZ F:ARG191 4.3 68.4 1.0 O1G F:ATP602 4.4 70.0 1.0 N F:THR165 4.6 65.9 1.0 O3A F:ATP602 4.6 70.0 1.0 CG F:GLU194 4.7 73.8 1.0 OE2 F:GLU190 4.7 71.8 1.0 NH1 B:ARG365 4.7 74.0 1.0 PA F:ATP602 4.7 70.0 1.0 O2A F:ATP602 4.7 70.0 1.0 NH2 F:ARG191 5.0 68.4 1.0

A.Nakano, K.Yokoyama, J.Kishikawa, K.Mitsuoka. Rotation Mechanism of Atp Synthases Driven By Atp Hydrolysis To Be Published.