Magnesium in PDB 8hvr: Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter

All present enzymatic activity of Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter:
2.7.7.6;

The structure of Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter also contains other interesting chemical elements:

Zinc

(Zn)

2 atoms

The binding sites of Magnesium atom in the Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter (pdb code 8hvr). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter, PDB code: 8hvr:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Afsr-Dependent Transcription Activation Complex with Afss Promoter within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1401 b:9.7 occ:1.00 OD2 D:ASP539 2.2 11.3 1.0 OD1 D:ASP535 2.4 13.5 1.0 OD2 D:ASP535 2.5 13.5 1.0 CG D:ASP535 2.7 13.5 1.0 CG D:ASP539 2.8 11.3 1.0 OD1 D:ASP539 2.8 11.3 1.0 O D:GLY538 3.8 19.6 1.0 NH2 D:ARG500 4.0 21.0 1.0 CB D:ASP535 4.2 13.5 1.0 CB D:ASP539 4.2 11.3 1.0 N D:ASP535 4.4 13.5 1.0 O D:ASP535 4.4 13.5 1.0 C D:GLY538 4.6 19.6 1.0 CA D:ASP535 4.6 13.5 1.0 C D:ASP535 4.7 13.5 1.0 N D:GLY538 4.8 19.6 1.0 CB D:ASP537 4.8 15.1 1.0 CA D:ASP539 5.0 11.3 1.0

Y.Wang, J.Zheng. Structural Basis of Transcription Activation By Streptomyces Antibiotic Regulatory Protein Family Regulator Afsr To Be Published.