Magnesium in PDB 8hw1: Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa

Pages:

>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 30; Page 4, Binding sites: 31 - 40; Page 5, Binding sites: 41 - 50; Page 6, Binding sites: 51 - 60; Page 7, Binding sites: 61 - 70; Page 8, Binding sites: 71 - 80; Page 9, Binding sites: 81 - 90; Page 10, Binding sites: 91 - 100; Page 11, Binding sites: 101 - 110; Page 12, Binding sites: 111 - 120; Page 13, Binding sites: 121 - 121;

Binding sites:

The binding sites of Magnesium atom in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa (pdb code 8hw1). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 121 binding sites of Magnesium where determined in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa, PDB code: 8hw1:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg601 b:28.5 occ:1.00 MG A:CLA601 0.0 28.5 1.0 NB A:CLA601 1.9 28.5 1.0 NA A:CLA601 2.0 28.5 1.0 ND A:CLA601 2.0 28.5 1.0 NC A:CLA601 2.0 28.5 1.0 C4D A:CLA601 2.9 28.5 1.0 C4A A:CLA601 3.0 28.5 1.0 C1B A:CLA601 3.0 28.5 1.0 C1C A:CLA601 3.0 28.5 1.0 C1A A:CLA601 3.0 28.5 1.0 C4B A:CLA601 3.1 28.5 1.0 C1D A:CLA601 3.1 28.5 1.0 C4C A:CLA601 3.1 28.5 1.0 CHB A:CLA601 3.3 28.5 1.0 CHA A:CLA601 3.4 28.5 1.0 CHC A:CLA601 3.4 28.5 1.0 CHD A:CLA601 3.5 28.5 1.0 C3D A:CLA601 4.1 28.5 1.0 C2B A:CLA601 4.2 28.5 1.0 C3B A:CLA601 4.2 28.5 1.0 C2D A:CLA601 4.2 28.5 1.0 C2C A:CLA601 4.3 28.5 1.0 C3A A:CLA601 4.3 28.5 1.0 C2A A:CLA601 4.3 28.5 1.0 C3C A:CLA601 4.3 28.5 1.0 CBA A:CLA601 4.6 28.5 1.0 CBD A:CLA601 4.9 28.5 1.0 CAA A:CLA601 4.9 28.5 1.0

Magnesium binding site 2 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg602 b:27.2 occ:1.00 MG A:CLA602 0.0 27.2 1.0 NB A:CLA602 1.9 27.2 1.0 ND A:CLA602 2.0 27.2 1.0 NA A:CLA602 2.0 27.2 1.0 NC A:CLA602 2.0 27.2 1.0 OE1 A:GLU124 2.8 28.3 1.0 C4D A:CLA602 2.9 27.2 1.0 C4A A:CLA602 3.0 27.2 1.0 C1B A:CLA602 3.0 27.2 1.0 C1C A:CLA602 3.0 27.2 1.0 C1A A:CLA602 3.0 27.2 1.0 C4B A:CLA602 3.1 27.2 1.0 C1D A:CLA602 3.1 27.2 1.0 C4C A:CLA602 3.1 27.2 1.0 C35 A:32N613 3.2 28.8 1.0 CHB A:CLA602 3.3 27.2 1.0 CHA A:CLA602 3.4 27.2 1.0 CHC A:CLA602 3.4 27.2 1.0 CHD A:CLA602 3.5 27.2 1.0 CD A:GLU124 3.9 28.3 1.0 C3D A:CLA602 4.1 27.2 1.0 C2B A:CLA602 4.2 27.2 1.0 C3B A:CLA602 4.2 27.2 1.0 C2D A:CLA602 4.2 27.2 1.0 C3A A:CLA602 4.3 27.2 1.0 C2C A:CLA602 4.3 27.2 1.0 C2A A:CLA602 4.3 27.2 1.0 C3C A:CLA602 4.3 27.2 1.0 OE2 A:GLU124 4.6 28.3 1.0 C34 A:32N613 4.6 28.8 1.0 CAA A:CLA602 4.9 27.2 1.0 NH1 A:ARG224 4.9 26.2 1.0 CBD A:CLA602 4.9 27.2 1.0 CG A:GLU124 4.9 28.3 1.0 C36 A:32N613 5.0 28.8 1.0

Magnesium binding site 3 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg603 b:28.8 occ:1.00 MG A:CLA603 0.0 28.8 1.0 NB A:CLA603 1.9 28.8 1.0 ND A:CLA603 2.0 28.8 1.0 NA A:CLA603 2.0 28.8 1.0 NC A:CLA603 2.0 28.8 1.0 OD1 A:ASN127 2.6 29.6 1.0 C4D A:CLA603 2.9 28.8 1.0 C4A A:CLA603 3.0 28.8 1.0 C1B A:CLA603 3.0 28.8 1.0 C1C A:CLA603 3.0 28.8 1.0 C1A A:CLA603 3.0 28.8 1.0 C4B A:CLA603 3.1 28.8 1.0 C1D A:CLA603 3.1 28.8 1.0 C4C A:CLA603 3.1 28.8 1.0 CHB A:CLA603 3.3 28.8 1.0 CHA A:CLA603 3.4 28.8 1.0 CHC A:CLA603 3.4 28.8 1.0 CHD A:CLA603 3.5 28.8 1.0 CG A:ASN127 3.7 29.6 1.0 C17 B:CLA601 4.1 28.5 1.0 C3D A:CLA603 4.1 28.8 1.0 C2B A:CLA603 4.2 28.8 1.0 C3B A:CLA603 4.2 28.8 1.0 ND2 A:ASN127 4.2 29.6 1.0 C2D A:CLA603 4.2 28.8 1.0 C2C A:CLA603 4.3 28.8 1.0 C3A A:CLA603 4.3 28.8 1.0 C2A A:CLA603 4.3 28.8 1.0 C3C A:CLA603 4.3 28.8 1.0 C16 B:CLA601 4.4 28.5 1.0 C15 B:CLA601 4.7 28.5 1.0 CB A:ASN127 4.9 29.6 1.0 CBD A:CLA603 4.9 28.8 1.0

Magnesium binding site 4 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg604 b:56.5 occ:1.00 MG A:CLA604 0.0 56.5 1.0 NB A:CLA604 1.9 56.5 1.0 ND A:CLA604 2.0 56.5 1.0 NA A:CLA604 2.0 56.5 1.0 NC A:CLA604 2.0 56.5 1.0 C4D A:CLA604 2.9 56.5 1.0 C4A A:CLA604 3.0 56.5 1.0 C1B A:CLA604 3.0 56.5 1.0 C1C A:CLA604 3.0 56.5 1.0 C1A A:CLA604 3.1 56.5 1.0 C4B A:CLA604 3.1 56.5 1.0 C1D A:CLA604 3.1 56.5 1.0 C4C A:CLA604 3.1 56.5 1.0 CHB A:CLA604 3.3 56.5 1.0 CHA A:CLA604 3.4 56.5 1.0 CHC A:CLA604 3.4 56.5 1.0 C2 A:CLA604 3.5 56.5 1.0 CHD A:CLA604 3.5 56.5 1.0 O2A A:CLA604 3.8 56.5 1.0 C1 A:CLA604 4.1 56.5 1.0 C3D A:CLA604 4.1 56.5 1.0 C2B A:CLA604 4.2 56.5 1.0 C3B A:CLA604 4.2 56.5 1.0 C2D A:CLA604 4.2 56.5 1.0 C2C A:CLA604 4.3 56.5 1.0 C3A A:CLA604 4.3 56.5 1.0 C3C A:CLA604 4.3 56.5 1.0 C2A A:CLA604 4.4 56.5 1.0 C3 A:CLA604 4.5 56.5 1.0 CGA A:CLA604 4.6 56.5 1.0 C5 A:CLA604 4.7 56.5 1.0 C6 A:CLA604 4.8 56.5 1.0 CBA A:CLA604 4.8 56.5 1.0 CBD A:CLA604 4.9 56.5 1.0

Magnesium binding site 5 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg605 b:34.9 occ:1.00 MG A:CLA605 0.0 34.9 1.0 ND A:CLA605 1.9 34.9 1.0 NB A:CLA605 1.9 34.9 1.0 NA A:CLA605 2.0 34.9 1.0 NC A:CLA605 2.0 34.9 1.0 OE1 A:GLU178 2.2 38.3 1.0 C4D A:CLA605 2.9 34.9 1.0 C4A A:CLA605 3.0 34.9 1.0 C1B A:CLA605 3.0 34.9 1.0 C1C A:CLA605 3.0 34.9 1.0 C1A A:CLA605 3.1 34.9 1.0 C4B A:CLA605 3.1 34.9 1.0 C1D A:CLA605 3.1 34.9 1.0 C4C A:CLA605 3.1 34.9 1.0 CHB A:CLA605 3.3 34.9 1.0 CHA A:CLA605 3.4 34.9 1.0 CD A:GLU178 3.4 38.3 1.0 CHC A:CLA605 3.4 34.9 1.0 CHD A:CLA605 3.5 34.9 1.0 CAB A:CLA611 3.9 46.8 1.0 CBB A:CLA611 4.0 46.8 1.0 OE2 A:GLU178 4.1 38.3 1.0 C3D A:CLA605 4.1 34.9 1.0 C2B A:CLA605 4.2 34.9 1.0 C2D A:CLA605 4.2 34.9 1.0 C3B A:CLA605 4.2 34.9 1.0 C2C A:CLA605 4.3 34.9 1.0 C2A A:CLA605 4.3 34.9 1.0 C3A A:CLA605 4.3 34.9 1.0 C3C A:CLA605 4.4 34.9 1.0 CMD A:CLA603 4.4 28.8 1.0 CG A:GLU178 4.5 38.3 1.0 OBD A:CLA603 4.7 28.8 1.0 CAA A:CLA605 4.7 34.9 1.0 CBD A:CLA605 4.9 34.9 1.0

Magnesium binding site 6 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg606 b:41.9 occ:1.00 MG A:CLA606 0.0 41.9 1.0 NB A:CLA606 1.9 41.9 1.0 ND A:CLA606 1.9 41.9 1.0 NA A:CLA606 1.9 41.9 1.0 NC A:CLA606 2.0 41.9 1.0 C4D A:CLA606 2.9 41.9 1.0 C4A A:CLA606 3.0 41.9 1.0 C1B A:CLA606 3.0 41.9 1.0 C1C A:CLA606 3.0 41.9 1.0 C1A A:CLA606 3.0 41.9 1.0 C4B A:CLA606 3.0 41.9 1.0 C1D A:CLA606 3.1 41.9 1.0 C4C A:CLA606 3.1 41.9 1.0 C36 A:XAT612 3.3 40.5 1.0 CHB A:CLA606 3.3 41.9 1.0 CHC A:CLA606 3.4 41.9 1.0 CHA A:CLA606 3.4 41.9 1.0 CHD A:CLA606 3.5 41.9 1.0 OE2 A:GLU219 3.6 35.0 1.0 C37 A:XAT612 3.8 40.5 1.0 C3D A:CLA606 4.1 41.9 1.0 C2B A:CLA606 4.2 41.9 1.0 C21 A:XAT612 4.2 40.5 1.0 C3B A:CLA606 4.2 41.9 1.0 C2D A:CLA606 4.2 41.9 1.0 C2A A:CLA606 4.3 41.9 1.0 C2C A:CLA606 4.3 41.9 1.0 C3A A:CLA606 4.3 41.9 1.0 C3C A:CLA606 4.3 41.9 1.0 CD A:GLU219 4.3 35.0 1.0 CAA A:CLA606 4.6 41.9 1.0 C28 A:XAT612 4.7 40.5 1.0 CG A:GLU219 4.8 35.0 1.0 CBD A:CLA606 4.9 41.9 1.0 NE A:ARG129 5.0 32.4 1.0

Magnesium binding site 7 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg607 b:33.9 occ:1.00 MG A:CLA607 0.0 33.9 1.0 NB A:CLA607 1.9 33.9 1.0 ND A:CLA607 1.9 33.9 1.0 NA A:CLA607 2.0 33.9 1.0 NC A:CLA607 2.0 33.9 1.0 OE2 A:GLU63 2.6 28.1 1.0 C4D A:CLA607 2.9 33.9 1.0 C4A A:CLA607 3.0 33.9 1.0 C1B A:CLA607 3.0 33.9 1.0 C1C A:CLA607 3.0 33.9 1.0 C1A A:CLA607 3.0 33.9 1.0 C4B A:CLA607 3.0 33.9 1.0 C1D A:CLA607 3.1 33.9 1.0 C4C A:CLA607 3.1 33.9 1.0 CHB A:CLA607 3.3 33.9 1.0 CHA A:CLA607 3.4 33.9 1.0 CHC A:CLA607 3.4 33.9 1.0 CHD A:CLA607 3.5 33.9 1.0 CD A:GLU63 3.9 28.1 1.0 C3D A:CLA607 4.1 33.9 1.0 C2B A:CLA607 4.2 33.9 1.0 C3B A:CLA607 4.2 33.9 1.0 C2D A:CLA607 4.2 33.9 1.0 C2C A:CLA607 4.3 33.9 1.0 C3A A:CLA607 4.3 33.9 1.0 C2A A:CLA607 4.3 33.9 1.0 C3C A:CLA607 4.4 33.9 1.0 OE1 A:GLU63 4.6 28.1 1.0 CG A:GLU63 4.8 28.1 1.0 CAA A:CLA607 4.9 33.9 1.0 CBD A:CLA607 4.9 33.9 1.0

Magnesium binding site 8 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg608 b:42.4 occ:1.00 MG A:CLA608 0.0 42.4 1.0 ND A:CLA608 1.9 42.4 1.0 NB A:CLA608 1.9 42.4 1.0 NA A:CLA608 1.9 42.4 1.0 NC A:CLA608 2.0 42.4 1.0 C4D A:CLA608 2.9 42.4 1.0 C4A A:CLA608 2.9 42.4 1.0 C1B A:CLA608 3.0 42.4 1.0 C1C A:CLA608 3.0 42.4 1.0 C4B A:CLA608 3.1 42.4 1.0 C1A A:CLA608 3.1 42.4 1.0 C1D A:CLA608 3.1 42.4 1.0 C4C A:CLA608 3.1 42.4 1.0 CHB A:CLA608 3.3 42.4 1.0 OD1 A:ASN222 3.4 31.3 1.0 CHC A:CLA608 3.4 42.4 1.0 CHA A:CLA608 3.4 42.4 1.0 CHD A:CLA608 3.5 42.4 1.0 C10 A:CLA607 3.5 33.9 1.0 C12 A:CLA607 3.5 33.9 1.0 C11 A:CLA607 3.7 33.9 1.0 C3D A:CLA608 4.1 42.4 1.0 C2B A:CLA608 4.2 42.4 1.0 C3A A:CLA608 4.2 42.4 1.0 C2D A:CLA608 4.2 42.4 1.0 C3B A:CLA608 4.2 42.4 1.0 C2C A:CLA608 4.2 42.4 1.0 C2A A:CLA608 4.3 42.4 1.0 C3C A:CLA608 4.3 42.4 1.0 C9 A:CLA607 4.4 33.9 1.0 CG A:ASN222 4.4 31.3 1.0 C8 A:CLA607 4.5 33.9 1.0 ND2 A:ASN222 4.9 31.3 1.0 CBD A:CLA608 4.9 42.4 1.0

Magnesium binding site 9 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg609 b:47.2 occ:1.00 MG A:CLA609 0.0 47.2 1.0 NB A:CLA609 1.9 47.2 1.0 ND A:CLA609 1.9 47.2 1.0 NA A:CLA609 2.0 47.2 1.0 NC A:CLA609 2.0 47.2 1.0 OE1 A:GLN236 2.7 47.0 1.0 C4D A:CLA609 2.9 47.2 1.0 C4A A:CLA609 3.0 47.2 1.0 C1B A:CLA609 3.0 47.2 1.0 C1C A:CLA609 3.0 47.2 1.0 C1A A:CLA609 3.0 47.2 1.0 C4B A:CLA609 3.1 47.2 1.0 C1D A:CLA609 3.1 47.2 1.0 C4C A:CLA609 3.1 47.2 1.0 CHB A:CLA609 3.3 47.2 1.0 CHA A:CLA609 3.4 47.2 1.0 CHC A:CLA609 3.4 47.2 1.0 CHD A:CLA609 3.5 47.2 1.0 O2A A:CLA609 3.6 47.2 1.0 CD A:GLN236 3.9 47.0 1.0 C2 A:CLA609 3.9 47.2 1.0 C1 A:CLA609 4.0 47.2 1.0 C3D A:CLA609 4.1 47.2 1.0 C2B A:CLA609 4.2 47.2 1.0 C3B A:CLA609 4.2 47.2 1.0 C2D A:CLA609 4.2 47.2 1.0 C2C A:CLA609 4.3 47.2 1.0 C3A A:CLA609 4.3 47.2 1.0 C2A A:CLA609 4.3 47.2 1.0 C3C A:CLA609 4.3 47.2 1.0 CGA A:CLA609 4.3 47.2 1.0 C7 A:CLA609 4.6 47.2 1.0 C3 A:CLA609 4.6 47.2 1.0 CBA A:CLA609 4.6 47.2 1.0 NE2 A:GLN236 4.7 47.0 1.0 CG A:GLN236 4.9 47.0 1.0 CBD A:CLA609 4.9 47.2 1.0

Magnesium binding site 10 out of 121 in the Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Far-Red Light-Harvesting Complex of Antarctic Alga Prasiola Crispa within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg610 b:61.5 occ:1.00 MG A:CLA610 0.0 61.5 1.0 NB A:CLA610 1.9 61.5 1.0 ND A:CLA610 1.9 61.5 1.0 NA A:CLA610 2.0 61.5 1.0 NC A:CLA610 2.0 61.5 1.0 C4D A:CLA610 2.9 61.5 1.0 C4A A:CLA610 2.9 61.5 1.0 C1B A:CLA610 3.0 61.5 1.0 C1C A:CLA610 3.0 61.5 1.0 C4B A:CLA610 3.1 61.5 1.0 C1A A:CLA610 3.1 61.5 1.0 C1D A:CLA610 3.1 61.5 1.0 C4C A:CLA610 3.1 61.5 1.0 CHB A:CLA610 3.3 61.5 1.0 CHC A:CLA610 3.4 61.5 1.0 CHA A:CLA610 3.4 61.5 1.0 NE2 A:HIS251 3.5 60.0 1.0 CHD A:CLA610 3.5 61.5 1.0 CD2 A:HIS251 4.1 60.0 1.0 C3D A:CLA610 4.1 61.5 1.0 C2B A:CLA610 4.2 61.5 1.0 C3B A:CLA610 4.2 61.5 1.0 C2D A:CLA610 4.2 61.5 1.0 C3A A:CLA610 4.2 61.5 1.0 C2C A:CLA610 4.3 61.5 1.0 C3C A:CLA610 4.3 61.5 1.0 C2A A:CLA610 4.4 61.5 1.0 CE1 A:HIS251 4.6 60.0 1.0 CBD A:CLA610 4.9 61.5 1.0

M.Kosugi, M.Kawasaki, Y.Shibata, K.Hara, S.Takaichi, T.Moriya, N.Adachi, Y.Kamei, Y.Kashino, S.Kudoh, H.Koike, T.Senda. Uphill Energy Transfer Mechanism For Photosynthesis in An Antarctic Alga To Be Published.