Atomistry » Magnesium » PDB 8hvr-8i6s » 8i0h
Atomistry »
  Magnesium »
    PDB 8hvr-8i6s »
      8i0h »

Magnesium in PDB 8i0h: Closed Conformation of Ctps with Datp Dutp Dgtp and Don

Enzymatic activity of Closed Conformation of Ctps with Datp Dutp Dgtp and Don

All present enzymatic activity of Closed Conformation of Ctps with Datp Dutp Dgtp and Don:
6.3.4.2;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Closed Conformation of Ctps with Datp Dutp Dgtp and Don (pdb code 8i0h). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Closed Conformation of Ctps with Datp Dutp Dgtp and Don, PDB code: 8i0h:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8i0h

Go back to Magnesium Binding Sites List in 8i0h
Magnesium binding site 1 out of 2 in the Closed Conformation of Ctps with Datp Dutp Dgtp and Don


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Closed Conformation of Ctps with Datp Dutp Dgtp and Don within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Mg401

b:57.5
occ:1.00
O2G A:DUT602 1.9 62.3 1.0
O2A A:DUT602 1.9 66.0 1.0
O2B A:DUT602 2.0 64.5 1.0
PB A:DUT602 3.0 72.8 1.0
PG A:DUT602 3.0 69.8 1.0
PA A:DUT602 3.2 53.2 1.0
O3B A:DUT602 3.4 63.1 1.0
O3A A:DUT602 3.5 71.6 1.0
O1G A:DUT602 3.6 63.5 1.0
O5' A:DUT602 4.1 59.3 1.0
O1A A:DUT602 4.3 60.3 1.0
O3G A:DUT602 4.3 70.5 1.0
C5' A:DUT602 4.3 66.8 1.0
O1B A:DUT602 4.3 73.3 1.0
CE G:LYS7 4.7 76.4 1.0
NZ G:LYS7 4.7 79.5 1.0

Magnesium binding site 2 out of 2 in 8i0h

Go back to Magnesium Binding Sites List in 8i0h
Magnesium binding site 2 out of 2 in the Closed Conformation of Ctps with Datp Dutp Dgtp and Don


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Closed Conformation of Ctps with Datp Dutp Dgtp and Don within 5.0Å range:
probe atom residue distance (Å) B Occ
H:Mg501

b:125.9
occ:1.00
O3G A:DGT603 2.6 111.8 1.0
O1A A:DGT603 2.8 115.5 1.0
O1B A:DGT603 3.3 112.9 1.0
O2A A:DGT603 3.4 114.5 1.0
PA A:DGT603 3.5 118.9 1.0
PG A:DGT603 3.9 115.2 1.0
O3A A:DGT603 4.0 108.0 1.0
PB A:DGT603 4.0 110.8 1.0
O1G A:DGT603 4.3 112.9 1.0
O3B A:DGT603 4.4 112.5 1.0
CD2 H:LEU18 4.9 89.6 1.0

Reference:

C.J.Guo, Z.Zhang, J.Zhong, J.L.Liu. Structural Basis of Bifunctional Ctp/Dctp Synthase To Be Published.
Page generated: Fri Oct 4 09:00:57 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy