Magnesium in PDB 8i3i: Acyl-Acp Synthetase Structure Bound to Amp-Pnp

The binding sites of Magnesium atom in the Acyl-Acp Synthetase Structure Bound to Amp-Pnp (pdb code 8i3i). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 4 binding sites of Magnesium where determined in the Acyl-Acp Synthetase Structure Bound to Amp-Pnp, PDB code: 8i3i:
Jump to Magnesium binding site number: 1; 2; 3; 4;

Magnesium binding site 1 out of 4 in the Acyl-Acp Synthetase Structure Bound to Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Acyl-Acp Synthetase Structure Bound to Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1001 b:49.7 occ:1.00 O2G A:ANP1002 2.2 51.4 1.0 O2B A:ANP1002 2.6 51.3 1.0 PG A:ANP1002 3.5 49.8 1.0 O2A A:ANP1002 3.8 53.7 1.0 PB A:ANP1002 3.8 45.1 1.0 N3B A:ANP1002 3.8 52.8 1.0 CE A:MET320 4.1 52.3 1.0 O1G A:ANP1002 4.1 53.1 1.0 O3' A:ANP1002 4.2 57.4 1.0 O5' A:ANP1002 4.3 57.3 1.0 OE2 A:GLU322 4.3 56.7 1.0 NH1 A:ARG426 4.5 55.4 1.0 PA A:ANP1002 4.5 54.4 1.0 O3A A:ANP1002 4.6 57.6 1.0 O3G A:ANP1002 4.7 57.8 1.0 O A:MET320 4.8 63.7 1.0 NZ A:LYS183 4.8 51.2 1.0 O1B A:ANP1002 4.9 54.1 1.0 CD A:GLU322 4.9 53.6 1.0

Magnesium binding site 2 out of 4 in the Acyl-Acp Synthetase Structure Bound to Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Acyl-Acp Synthetase Structure Bound to Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg1001 b:49.7 occ:1.00 O2G D:ANP1002 2.2 51.4 1.0 O2B D:ANP1002 2.6 51.3 1.0 PG D:ANP1002 3.5 49.8 1.0 O2A D:ANP1002 3.8 53.7 1.0 PB D:ANP1002 3.8 45.1 1.0 N3B D:ANP1002 3.8 52.8 1.0 CE D:MET320 4.1 52.3 1.0 O1G D:ANP1002 4.1 53.1 1.0 O3' D:ANP1002 4.2 57.4 1.0 O5' D:ANP1002 4.3 57.3 1.0 OE2 D:GLU322 4.3 56.7 1.0 NH1 D:ARG426 4.5 55.4 1.0 PA D:ANP1002 4.5 54.4 1.0 O3A D:ANP1002 4.6 57.6 1.0 O3G D:ANP1002 4.7 57.8 1.0 O D:MET320 4.8 63.7 1.0 NZ D:LYS183 4.8 51.2 1.0 O1B D:ANP1002 4.9 54.1 1.0 CD D:GLU322 4.9 53.6 1.0

Magnesium binding site 3 out of 4 in the Acyl-Acp Synthetase Structure Bound to Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Acyl-Acp Synthetase Structure Bound to Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg1001 b:49.7 occ:1.00 O2G B:ANP1002 2.2 51.4 1.0 O2B B:ANP1002 2.6 51.3 1.0 PG B:ANP1002 3.5 49.8 1.0 O2A B:ANP1002 3.8 53.7 1.0 PB B:ANP1002 3.8 45.1 1.0 N3B B:ANP1002 3.8 52.8 1.0 CE B:MET320 4.1 52.3 1.0 O1G B:ANP1002 4.1 53.1 1.0 O3' B:ANP1002 4.2 57.4 1.0 O5' B:ANP1002 4.3 57.3 1.0 OE2 B:GLU322 4.3 56.7 1.0 NH1 B:ARG426 4.5 55.4 1.0 PA B:ANP1002 4.5 54.4 1.0 O3A B:ANP1002 4.6 57.6 1.0 O3G B:ANP1002 4.7 57.8 1.0 O B:MET320 4.8 63.7 1.0 NZ B:LYS183 4.8 51.2 1.0 O1B B:ANP1002 4.9 54.1 1.0 CD B:GLU322 4.9 53.6 1.0

Magnesium binding site 4 out of 4 in the Acyl-Acp Synthetase Structure Bound to Amp-Pnp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Acyl-Acp Synthetase Structure Bound to Amp-Pnp within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg1001 b:49.7 occ:1.00 O2G C:ANP1002 2.2 51.4 1.0 O2B C:ANP1002 2.6 51.3 1.0 PG C:ANP1002 3.5 49.8 1.0 O2A C:ANP1002 3.8 53.7 1.0 PB C:ANP1002 3.8 45.1 1.0 N3B C:ANP1002 3.8 52.8 1.0 CE C:MET320 4.1 52.3 1.0 O1G C:ANP1002 4.1 53.1 1.0 O3' C:ANP1002 4.2 57.4 1.0 O5' C:ANP1002 4.3 57.3 1.0 OE2 C:GLU322 4.3 56.7 1.0 NH1 C:ARG426 4.5 55.4 1.0 PA C:ANP1002 4.5 54.4 1.0 O3A C:ANP1002 4.6 57.6 1.0 O3G C:ANP1002 4.7 57.8 1.0 O C:MET320 4.8 63.7 1.0 NZ C:LYS183 4.8 51.2 1.0 O1B C:ANP1002 4.9 54.1 1.0 CD C:GLU322 4.9 53.6 1.0

H.Huang, C.Wang, S.Chang, T.Cui, Y.Xu, H.Zhang, C.Zhou, X.Zhang, Y.Feng. Acyl-Acp Synthetase Structure Bound to Amp-Pnp To Be Published.