Magnesium in PDB 8is8: Crtmlike with Two Gspp Molecules

The structure of Crtmlike with Two Gspp Molecules, PDB code: 8is8 was solved by J.Y.Park, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.68 / 2.30
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	50.297, 64.793, 170.702, 90, 90, 90
R / Rfree (%)	19.5 / 24.1

The binding sites of Magnesium atom in the Crtmlike with Two Gspp Molecules (pdb code 8is8). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 3 binding sites of Magnesium where determined in the Crtmlike with Two Gspp Molecules, PDB code: 8is8:
Jump to Magnesium binding site number: 1; 2; 3;

Magnesium binding site 1 out of 3 in the Crtmlike with Two Gspp Molecules


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crtmlike with Two Gspp Molecules within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg303 b:35.2 occ:1.00 O A:HOH406 2.0 32.7 1.0 O A:HOH446 2.0 36.5 1.0 OD2 A:ASP168 2.1 34.0 1.0 OD1 A:ASN164 2.2 33.3 1.0 O A:HOH415 2.4 35.8 1.0 O3A A:GST301 2.5 40.4 1.0 CG A:ASN164 3.1 38.5 1.0 CG A:ASP168 3.1 37.5 1.0 ND2 A:ASN164 3.4 43.2 1.0 CB A:ASP168 3.5 30.3 1.0 PA A:GST301 3.6 46.8 1.0 O1B A:GST301 3.7 43.8 1.0 O A:HOH412 3.8 39.5 1.0 O2A A:GST301 4.0 40.4 1.0 O2B A:GST301 4.1 46.1 1.0 O A:ASN164 4.1 26.8 1.0 OD1 A:ASP168 4.3 34.8 1.0 OD1 A:ASP172 4.4 37.0 1.0 NH2 A:ARG167 4.4 30.2 1.0 OD2 A:ASP172 4.4 36.9 1.0 PB A:GST301 4.4 45.2 1.0 C A:ASN164 4.4 29.3 1.0 CB A:ASN164 4.5 35.5 1.0 O A:HOH421 4.5 35.4 1.0 OE2 A:GLU171 4.7 49.1 1.0 CG A:ASP172 4.8 37.6 1.0 MG A:MG305 4.8 41.0 1.0 N A:ILE165 4.9 29.3 1.0 O3B A:GST301 4.9 44.0 1.0 CA A:ASN164 5.0 35.0 1.0 O1A A:GST301 5.0 43.7 1.0

Magnesium binding site 2 out of 3 in the Crtmlike with Two Gspp Molecules


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Crtmlike with Two Gspp Molecules within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg304 b:41.4 occ:1.00 O1A A:GST301 2.0 43.7 1.0 O A:HOH441 2.0 36.3 1.0 O A:HOH475 2.2 38.6 1.0 OD2 A:ASP52 2.2 36.7 1.0 OD1 A:ASP48 2.2 39.2 1.0 O A:HOH419 2.3 35.5 1.0 MG A:MG305 2.8 41.0 1.0 CG A:ASP48 2.9 41.8 1.0 OD2 A:ASP48 3.0 40.8 1.0 CG A:ASP52 3.0 38.5 1.0 OD1 A:ASP52 3.3 38.9 1.0 PA A:GST301 3.4 46.8 1.0 O2A A:GST301 3.8 40.4 1.0 O3A A:GST301 4.1 40.4 1.0 O A:HOH407 4.1 41.0 1.0 OE1 A:GLN107 4.2 39.4 1.0 NE2 A:GLN107 4.2 38.8 1.0 OD2 A:ASP110 4.2 36.5 1.0 O A:HOH412 4.2 39.5 1.0 OH A:TYR125 4.3 30.9 1.0 CB A:ASP48 4.3 37.8 1.0 CB A:ASP52 4.4 40.1 1.0 O3B A:GST301 4.5 44.0 1.0 O A:ASP48 4.6 41.2 1.0 O1B A:GST301 4.6 43.8 1.0 CD A:GLN107 4.6 39.7 1.0 NH1 A:ARG177 4.7 40.6 1.0 CA A:ASP48 4.8 40.7 1.0 O A:HOH421 4.9 35.4 1.0

Magnesium binding site 3 out of 3 in the Crtmlike with Two Gspp Molecules


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Crtmlike with Two Gspp Molecules within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg305 b:41.0 occ:1.00 O1A A:GST301 1.9 43.7 1.0 OD2 A:ASP52 2.1 36.7 1.0 O A:HOH407 2.2 41.0 1.0 O3B A:GST301 2.2 44.0 1.0 O3A A:GST301 2.6 40.4 1.0 PA A:GST301 2.6 46.8 1.0 OD2 A:ASP48 2.7 40.8 1.0 MG A:MG304 2.8 41.4 1.0 PB A:GST301 3.2 45.2 1.0 CG A:ASP52 3.3 38.5 1.0 O1B A:GST301 3.3 43.8 1.0 O A:HOH475 3.5 38.6 1.0 O A:HOH412 3.6 39.5 1.0 CG A:ASP48 3.6 41.8 1.0 OD1 A:ASP48 3.9 39.2 1.0 O2A A:GST301 4.0 40.4 1.0 CB A:ASP52 4.0 40.1 1.0 OD1 A:ASP52 4.2 38.9 1.0 O A:HOH419 4.3 35.5 1.0 NH2 A:ARG45 4.3 46.8 1.0 O2B A:GST301 4.3 46.1 1.0 O A:HOH415 4.4 35.8 1.0 O A:HOH476 4.5 39.9 1.0 O A:HOH500 4.5 46.3 1.0 O A:HOH401 4.6 47.7 1.0 O A:HOH441 4.7 36.3 1.0 S1 A:GST301 4.7 64.2 1.0 C1 A:GST301 4.7 54.0 1.0 MG A:MG303 4.8 35.2 1.0

J.Y.Park, J.Y.Park. N/A N/A.