Magnesium in PDB 8j3z: Cryo-Em Structure of Atp-U46619-Bound ABCC4
Enzymatic activity of Cryo-Em Structure of Atp-U46619-Bound ABCC4
All present enzymatic activity of Cryo-Em Structure of Atp-U46619-Bound ABCC4:
7.6.2.2;
7.6.2.3;
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Cryo-Em Structure of Atp-U46619-Bound ABCC4
(pdb code 8j3z). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the
Cryo-Em Structure of Atp-U46619-Bound ABCC4, PDB code: 8j3z:
Jump to Magnesium binding site number:
1;
2;
Magnesium binding site 1 out
of 2 in 8j3z
Go back to
Magnesium Binding Sites List in 8j3z
Magnesium binding site 1 out
of 2 in the Cryo-Em Structure of Atp-U46619-Bound ABCC4
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Cryo-Em Structure of Atp-U46619-Bound ABCC4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1402
b:120.2
occ:1.00
|
O2B
|
A:ATP1401
|
2.0
|
119.6
|
1.0
|
O3G
|
A:ATP1401
|
2.1
|
119.6
|
1.0
|
OG
|
A:SER1082
|
2.6
|
114.4
|
1.0
|
O3B
|
A:ATP1401
|
2.6
|
119.6
|
1.0
|
PB
|
A:ATP1401
|
2.8
|
119.6
|
1.0
|
PG
|
A:ATP1401
|
2.9
|
119.6
|
1.0
|
O3A
|
A:ATP1401
|
3.6
|
119.6
|
1.0
|
OE1
|
A:GLN1122
|
3.6
|
105.6
|
1.0
|
CB
|
A:SER1082
|
3.7
|
114.4
|
1.0
|
O2G
|
A:ATP1401
|
3.8
|
119.6
|
1.0
|
OD1
|
A:ASP1201
|
3.9
|
108.9
|
1.0
|
O1G
|
A:ATP1401
|
4.1
|
119.6
|
1.0
|
O1B
|
A:ATP1401
|
4.1
|
119.6
|
1.0
|
N
|
A:SER1082
|
4.4
|
114.4
|
1.0
|
OD2
|
A:ASP1201
|
4.5
|
108.9
|
1.0
|
CD
|
A:GLN1122
|
4.6
|
105.6
|
1.0
|
CG
|
A:ASP1201
|
4.6
|
108.9
|
1.0
|
CA
|
A:SER1082
|
4.6
|
114.4
|
1.0
|
CE
|
A:LYS1081
|
4.8
|
118.1
|
1.0
|
PA
|
A:ATP1401
|
4.9
|
119.6
|
1.0
|
|
Magnesium binding site 2 out
of 2 in 8j3z
Go back to
Magnesium Binding Sites List in 8j3z
Magnesium binding site 2 out
of 2 in the Cryo-Em Structure of Atp-U46619-Bound ABCC4
 Mono view
 Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Cryo-Em Structure of Atp-U46619-Bound ABCC4 within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg1404
b:120.1
occ:1.00
|
NE2
|
A:GLN480
|
2.5
|
115.1
|
1.0
|
O2B
|
A:ATP1405
|
2.5
|
120.7
|
1.0
|
OE1
|
A:GLN480
|
2.6
|
115.1
|
1.0
|
OG
|
A:SER452
|
2.6
|
119.2
|
1.0
|
CD
|
A:GLN480
|
2.6
|
115.1
|
1.0
|
O3B
|
A:ATP1405
|
2.9
|
120.7
|
1.0
|
PB
|
A:ATP1405
|
3.3
|
120.7
|
1.0
|
O2G
|
A:ATP1405
|
3.5
|
120.7
|
1.0
|
PG
|
A:ATP1405
|
3.7
|
120.7
|
1.0
|
OD1
|
A:ASP559
|
3.7
|
118.8
|
1.0
|
CG
|
A:GLN480
|
3.8
|
115.1
|
1.0
|
CB
|
A:SER452
|
3.8
|
119.2
|
1.0
|
O3G
|
A:ATP1405
|
3.9
|
120.7
|
1.0
|
O3A
|
A:ATP1405
|
4.1
|
120.7
|
1.0
|
N
|
A:SER452
|
4.1
|
119.2
|
1.0
|
CB
|
A:GLN480
|
4.3
|
115.1
|
1.0
|
CG1
|
A:VAL590
|
4.4
|
124.7
|
1.0
|
CE
|
A:LYS451
|
4.4
|
122.3
|
1.0
|
CG
|
A:ASP559
|
4.5
|
118.8
|
1.0
|
CA
|
A:SER452
|
4.5
|
119.2
|
1.0
|
O1B
|
A:ATP1405
|
4.5
|
120.7
|
1.0
|
OD2
|
A:ASP559
|
4.5
|
118.8
|
1.0
|
CB
|
A:LYS451
|
4.8
|
122.3
|
1.0
|
|
Reference:
Y.Chen,
L.Wang,
W.T.Hou,
C.Z.Zhou,
Y.Chen,
Q.Li.
Cryo-Em Structure OFABCC4 Nat Cardiovasc Res 2023.
ISSN: ESSN 2731-0590
Page generated: Fri Oct 4 12:04:15 2024
|