Magnesium in PDB 8jup: Crystal Structure of A Receptor Like Kinase From Rice

All present enzymatic activity of Crystal Structure of A Receptor Like Kinase From Rice:
2.7.11.1;

The structure of Crystal Structure of A Receptor Like Kinase From Rice, PDB code: 8jup was solved by Z.Ming, Q.Zhao, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	19.28 / 1.98
Space group	P 32 2 1
Cell size a, b, c (Å), α, β, γ (°)	71.14, 71.14, 167.98, 90, 90, 120
R / Rfree (%)	20.1 / 22.1

The binding sites of Magnesium atom in the Crystal Structure of A Receptor Like Kinase From Rice (pdb code 8jup). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of A Receptor Like Kinase From Rice, PDB code: 8jup:

Magnesium binding site 1 out of 1 in the Crystal Structure of A Receptor Like Kinase From Rice


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of A Receptor Like Kinase From Rice within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:55.8 occ:1.00 OD2 A:ASP173 2.2 37.6 1.0 O A:HOH504 2.2 48.7 1.0 O3B A:ATP401 2.4 217.4 1.0 O A:HOH613 2.7 37.8 1.0 OD1 A:ASP173 2.7 26.1 1.0 CG A:ASP173 2.8 34.0 1.0 O1B A:ATP401 3.3 60.4 1.0 PB A:ATP401 3.4 54.5 1.0 PG A:ATP401 3.4 79.8 1.0 O2G A:ATP401 3.4 86.1 1.0 O A:HOH669 3.5 35.6 1.0 O3G A:ATP401 3.6 77.1 1.0 O A:HOH595 3.7 28.6 1.0 O3A A:ATP401 3.8 219.9 1.0 O A:HOH508 4.1 42.6 1.0 NZ A:LYS50 4.1 30.5 1.0 O2A A:ATP401 4.2 59.3 1.0 CB A:ASP173 4.3 26.7 1.0 PA A:ATP401 4.6 54.8 1.0 O2B A:ATP401 4.7 74.2 1.0 O1G A:ATP401 4.7 79.5 1.0 CE A:LYS50 5.0 38.8 1.0

Z.Ming, Q.Zhao. An Active State Formation Mechanism of Receptor Kinase in Plant Plant Commun. 2024.
ISSN: ISSN 2590-3462