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Magnesium in PDB 8jw0: Psi-Acppci Supercomplex From Amphidinium Carterae

Other elements in 8jw0:

The structure of Psi-Acppci Supercomplex From Amphidinium Carterae also contains other interesting chemical elements:

Iron (Fe) 12 atoms

Magnesium Binding Sites:

Magnesium binding site 1 out of 262 in 8jw0

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Magnesium binding site 1 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg801

b:62.0
occ:1.00
MG a:CLA801 0.0 62.0 1.0
NB a:CLA801 2.0 62.0 1.0
ND a:CLA801 2.0 62.0 1.0
NA a:CLA801 2.1 62.0 1.0
NC a:CLA801 2.1 62.0 1.0
C4D a:CLA801 2.9 62.0 1.0
C1B a:CLA801 3.0 62.0 1.0
C4A a:CLA801 3.0 62.0 1.0
C4B a:CLA801 3.0 62.0 1.0
C1C a:CLA801 3.1 62.0 1.0
NE2 a:HIS573 3.1 62.0 1.0
C4C a:CLA801 3.1 62.0 1.0
C1A a:CLA801 3.1 62.0 1.0
C1D a:CLA801 3.1 62.0 1.0
CHB a:CLA801 3.4 62.0 1.0
CHC a:CLA801 3.4 62.0 1.0
CAB b:CLA704 3.4 62.5 1.0
CHA a:CLA801 3.5 62.0 1.0
CHD a:CLA801 3.5 62.0 1.0
C3B b:CLA704 3.8 62.5 1.0
CD2 a:HIS573 3.8 62.0 1.0
CE1 a:HIS573 4.0 62.0 1.0
C4B b:CLA704 4.1 62.5 1.0
CHC b:CLA704 4.1 62.5 1.0
C3D a:CLA801 4.2 62.0 1.0
C2B a:CLA801 4.2 62.0 1.0
C3B a:CLA801 4.3 62.0 1.0
C2C a:CLA801 4.3 62.0 1.0
C2D a:CLA801 4.3 62.0 1.0
C3C a:CLA801 4.3 62.0 1.0
C3A a:CLA801 4.4 62.0 1.0
C2A a:CLA801 4.4 62.0 1.0
C2B b:CLA704 4.5 62.5 1.0
CBB b:CLA704 4.6 62.5 1.0
C1C b:CLA704 4.8 62.5 1.0
CBD a:CLA801 4.9 62.0 1.0
NB b:CLA704 5.0 62.5 1.0
CMA a:CLA801 5.0 62.0 1.0

Magnesium binding site 2 out of 262 in 8jw0

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Magnesium binding site 2 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg802

b:62.2
occ:1.00
MG a:CLA802 0.0 62.2 1.0
NB a:CLA802 2.0 62.2 1.0
ND a:CLA802 2.0 62.2 1.0
NC a:CLA802 2.1 62.2 1.0
NA a:CLA802 2.1 62.2 1.0
C4D a:CLA802 2.9 62.2 1.0
C1B a:CLA802 3.0 62.2 1.0
C4A a:CLA802 3.0 62.2 1.0
C4B a:CLA802 3.1 62.2 1.0
C1C a:CLA802 3.1 62.2 1.0
C4C a:CLA802 3.1 62.2 1.0
C1A a:CLA802 3.1 62.2 1.0
C1D a:CLA802 3.1 62.2 1.0
CE a:MET581 3.3 61.0 1.0
CHB a:CLA802 3.4 62.2 1.0
CHC a:CLA802 3.4 62.2 1.0
SD a:MET581 3.4 61.0 1.0
CHA a:CLA802 3.5 62.2 1.0
NE1 b:TRP467 3.5 59.3 1.0
CHD a:CLA802 3.5 62.2 1.0
CG a:MET581 3.7 61.0 1.0
CZ2 b:TRP467 4.0 59.3 1.0
CE2 b:TRP467 4.1 59.3 1.0
C3D a:CLA802 4.3 62.2 1.0
C2B a:CLA802 4.3 62.2 1.0
C3B a:CLA802 4.3 62.2 1.0
C2C a:CLA802 4.3 62.2 1.0
C2D a:CLA802 4.3 62.2 1.0
C3C a:CLA802 4.4 62.2 1.0
C3A a:CLA802 4.4 62.2 1.0
CB a:MET581 4.4 61.0 1.0
C2A a:CLA802 4.4 62.2 1.0
CD1 b:TRP467 4.6 59.3 1.0
CBD a:CLA802 4.9 62.2 1.0
CMC b:CLA703 4.9 63.5 1.0
CAB b:CLA703 5.0 63.5 1.0

Magnesium binding site 3 out of 262 in 8jw0

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Magnesium binding site 3 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg803

b:60.9
occ:1.00
MG a:CLA803 0.0 60.9 1.0
NB a:CLA803 2.0 60.9 1.0
ND a:CLA803 2.0 60.9 1.0
NC a:CLA803 2.1 60.9 1.0
NA a:CLA803 2.1 60.9 1.0
C4D a:CLA803 2.9 60.9 1.0
C1B a:CLA803 3.0 60.9 1.0
C4B a:CLA803 3.0 60.9 1.0
C4A a:CLA803 3.0 60.9 1.0
C1C a:CLA803 3.1 60.9 1.0
C4C a:CLA803 3.1 60.9 1.0
C1A a:CLA803 3.1 60.9 1.0
C1D a:CLA803 3.2 60.9 1.0
CBB b:CLA705 3.2 61.4 1.0
CHB a:CLA803 3.4 60.9 1.0
CHC a:CLA803 3.4 60.9 1.0
CHA a:CLA803 3.5 60.9 1.0
CHD a:CLA803 3.5 60.9 1.0
CAB b:CLA705 3.8 61.4 1.0
CB b:ALA543 4.2 60.4 1.0
C2B a:CLA803 4.2 60.9 1.0
C3B a:CLA803 4.2 60.9 1.0
C3D a:CLA803 4.2 60.9 1.0
C2C a:CLA803 4.3 60.9 1.0
C2D a:CLA803 4.3 60.9 1.0
C3C a:CLA803 4.4 60.9 1.0
C3A a:CLA803 4.4 60.9 1.0
C2A a:CLA803 4.5 60.9 1.0
C2 a:CLA801 4.5 62.0 1.0
C20 a:CLA801 4.5 62.0 1.0
OD1 a:ASN497 4.6 61.8 1.0
C3B b:CLA705 4.6 61.4 1.0
C3 a:CLA801 4.9 62.0 1.0
C5 a:CLA801 4.9 62.0 1.0
CBD a:CLA803 4.9 60.9 1.0

Magnesium binding site 4 out of 262 in 8jw0

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Magnesium binding site 4 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg804

b:69.9
occ:1.00
MG a:CLA804 0.0 69.9 1.0
NB a:CLA804 2.0 69.9 1.0
ND a:CLA804 2.0 69.9 1.0
NC a:CLA804 2.1 69.9 1.0
NA a:CLA804 2.1 69.9 1.0
NE2 a:HIS32 2.9 68.7 1.0
C4D a:CLA804 2.9 69.9 1.0
C1B a:CLA804 3.0 69.9 1.0
C4A a:CLA804 3.0 69.9 1.0
C4B a:CLA804 3.1 69.9 1.0
C1C a:CLA804 3.1 69.9 1.0
C4C a:CLA804 3.1 69.9 1.0
C1D a:CLA804 3.2 69.9 1.0
C1A a:CLA804 3.2 69.9 1.0
CE1 a:HIS32 3.3 68.7 1.0
CHB a:CLA804 3.4 69.9 1.0
CHC a:CLA804 3.4 69.9 1.0
CHA a:CLA804 3.5 69.9 1.0
CHD a:CLA804 3.5 69.9 1.0
CB j:PRO43 3.6 69.3 1.0
CG j:PRO43 4.1 69.3 1.0
CD2 a:HIS32 4.1 68.7 1.0
C3D a:CLA804 4.3 69.9 1.0
C2B a:CLA804 4.3 69.9 1.0
C3B a:CLA804 4.3 69.9 1.0
C2C a:CLA804 4.3 69.9 1.0
C2D a:CLA804 4.4 69.9 1.0
C3C a:CLA804 4.4 69.9 1.0
C3A a:CLA804 4.4 69.9 1.0
C2A a:CLA804 4.5 69.9 1.0
ND1 a:HIS32 4.5 68.7 1.0
C31 j:PID101 4.7 76.3 1.0
CG a:HIS32 4.9 68.7 1.0
CBD a:CLA804 4.9 69.9 1.0
C26 j:PID101 5.0 76.3 1.0
CA j:PRO43 5.0 69.3 1.0

Magnesium binding site 5 out of 262 in 8jw0

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Magnesium binding site 5 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg805

b:72.9
occ:1.00
MG a:CLA805 0.0 72.9 1.0
NB a:CLA805 2.0 72.9 1.0
ND a:CLA805 2.0 72.9 1.0
NA a:CLA805 2.1 72.9 1.0
NC a:CLA805 2.1 72.9 1.0
NE2 a:HIS36 2.9 71.3 1.0
C4D a:CLA805 2.9 72.9 1.0
C1B a:CLA805 3.0 72.9 1.0
C4A a:CLA805 3.0 72.9 1.0
C4B a:CLA805 3.1 72.9 1.0
C1C a:CLA805 3.1 72.9 1.0
C4C a:CLA805 3.1 72.9 1.0
C1A a:CLA805 3.1 72.9 1.0
C1D a:CLA805 3.2 72.9 1.0
CHB a:CLA805 3.4 72.9 1.0
CHC a:CLA805 3.4 72.9 1.0
CHA a:CLA805 3.5 72.9 1.0
CHD a:CLA805 3.5 72.9 1.0
CD2 a:HIS36 3.6 71.3 1.0
CE1 a:HIS36 4.0 71.3 1.0
C7 a:CLA812 4.2 74.9 1.0
C3D a:CLA805 4.3 72.9 1.0
C2B a:CLA805 4.3 72.9 1.0
C5 a:CLA812 4.3 74.9 1.0
C3B a:CLA805 4.3 72.9 1.0
C2C a:CLA805 4.3 72.9 1.0
C2D a:CLA805 4.4 72.9 1.0
C3C a:CLA805 4.4 72.9 1.0
C3A a:CLA805 4.4 72.9 1.0
C2A a:CLA805 4.5 72.9 1.0
CBB a:CLA804 4.7 69.9 1.0
C6 a:CLA812 4.9 74.9 1.0
CG a:HIS36 4.9 71.3 1.0
CBB a:CLA806 4.9 74.5 1.0
CBD a:CLA805 4.9 72.9 1.0

Magnesium binding site 6 out of 262 in 8jw0

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Magnesium binding site 6 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg806

b:74.5
occ:1.00
MG a:CLA806 0.0 74.5 1.0
NB a:CLA806 2.0 74.5 1.0
ND a:CLA806 2.0 74.5 1.0
NC a:CLA806 2.1 74.5 1.0
NA a:CLA806 2.1 74.5 1.0
OD1 a:ASN52 2.8 73.7 1.0
C4D a:CLA806 2.9 74.5 1.0
C1B a:CLA806 3.0 74.5 1.0
C4A a:CLA806 3.0 74.5 1.0
C4B a:CLA806 3.1 74.5 1.0
C1C a:CLA806 3.1 74.5 1.0
C4C a:CLA806 3.1 74.5 1.0
C1A a:CLA806 3.1 74.5 1.0
C1D a:CLA806 3.1 74.5 1.0
CMB a:CLA825 3.2 68.1 1.0
CHB a:CLA806 3.4 74.5 1.0
CHC a:CLA806 3.4 74.5 1.0
CHA a:CLA806 3.5 74.5 1.0
CHD a:CLA806 3.5 74.5 1.0
CG a:ASN52 3.7 73.7 1.0
ND2 a:ASN52 4.0 73.7 1.0
C3D a:CLA806 4.3 74.5 1.0
C2B a:CLA806 4.3 74.5 1.0
C3B a:CLA806 4.3 74.5 1.0
C2C a:CLA806 4.3 74.5 1.0
C2D a:CLA806 4.4 74.5 1.0
C3C a:CLA806 4.4 74.5 1.0
C3A a:CLA806 4.4 74.5 1.0
C2A a:CLA806 4.5 74.5 1.0
C2B a:CLA825 4.6 68.1 1.0
CG1 a:VAL48 4.7 74.1 1.0
CD1 a:LEU277 4.9 69.3 1.0
CB a:ASN52 4.9 73.7 1.0
CBD a:CLA806 4.9 74.5 1.0
CD2 a:LEU277 5.0 69.3 1.0
O a:VAL48 5.0 74.1 1.0

Magnesium binding site 7 out of 262 in 8jw0

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Magnesium binding site 7 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg807

b:69.6
occ:1.00
MG a:CLA807 0.0 69.6 1.0
NB a:CLA807 2.0 69.6 1.0
ND a:CLA807 2.0 69.6 1.0
NC a:CLA807 2.1 69.6 1.0
NA a:CLA807 2.1 69.6 1.0
NE2 a:HIS55 2.9 72.7 1.0
C4D a:CLA807 2.9 69.6 1.0
C1B a:CLA807 3.0 69.6 1.0
C4A a:CLA807 3.0 69.6 1.0
C4B a:CLA807 3.1 69.6 1.0
C1C a:CLA807 3.1 69.6 1.0
C4C a:CLA807 3.1 69.6 1.0
C1A a:CLA807 3.1 69.6 1.0
C1D a:CLA807 3.2 69.6 1.0
CHB a:CLA807 3.4 69.6 1.0
C14 a:CLA807 3.4 69.6 1.0
CHC a:CLA807 3.4 69.6 1.0
CHA a:CLA807 3.5 69.6 1.0
CD2 a:HIS55 3.5 72.7 1.0
CHD a:CLA807 3.5 69.6 1.0
C13 a:CLA807 3.5 69.6 1.0
CE1 a:HIS55 4.1 72.7 1.0
C15 a:CLA807 4.2 69.6 1.0
C3D a:CLA807 4.3 69.6 1.0
C2B a:CLA807 4.3 69.6 1.0
C3B a:CLA807 4.3 69.6 1.0
C2C a:CLA807 4.3 69.6 1.0
C3C a:CLA807 4.4 69.6 1.0
C2D a:CLA807 4.4 69.6 1.0
C3A a:CLA807 4.4 69.6 1.0
C2A a:CLA807 4.4 69.6 1.0
C12 a:CLA807 4.8 69.6 1.0
CG a:HIS55 4.8 72.7 1.0
CBD a:CLA807 4.9 69.6 1.0

Magnesium binding site 8 out of 262 in 8jw0

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Magnesium binding site 8 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg808

b:73.3
occ:1.00
MG a:CLA808 0.0 73.3 1.0
NB a:CLA808 2.0 73.3 1.0
ND a:CLA808 2.0 73.3 1.0
NC a:CLA808 2.1 73.3 1.0
NA a:CLA808 2.1 73.3 1.0
C4D a:CLA808 2.9 73.3 1.0
C1B a:CLA808 3.0 73.3 1.0
CE1 a:HIS69 3.0 73.7 1.0
C4A a:CLA808 3.0 73.3 1.0
C4B a:CLA808 3.1 73.3 1.0
C1C a:CLA808 3.1 73.3 1.0
C4C a:CLA808 3.1 73.3 1.0
C1A a:CLA808 3.1 73.3 1.0
C1D a:CLA808 3.2 73.3 1.0
CHB a:CLA808 3.4 73.3 1.0
NE2 a:HIS69 3.4 73.7 1.0
CHC a:CLA808 3.4 73.3 1.0
CHA a:CLA808 3.5 73.3 1.0
CHD a:CLA808 3.5 73.3 1.0
ND1 a:HIS69 4.2 73.7 1.0
C3D a:CLA808 4.3 73.3 1.0
C2B a:CLA808 4.3 73.3 1.0
C3B a:CLA808 4.3 73.3 1.0
C2C a:CLA808 4.3 73.3 1.0
C2D a:CLA808 4.4 73.3 1.0
C3C a:CLA808 4.4 73.3 1.0
C3A a:CLA808 4.4 73.3 1.0
C2A a:CLA808 4.5 73.3 1.0
CD2 a:HIS69 4.7 73.7 1.0
CBA a:CLA808 4.9 73.3 1.0
CBD a:CLA808 4.9 73.3 1.0

Magnesium binding site 9 out of 262 in 8jw0

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Magnesium binding site 9 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg809

b:69.2
occ:1.00
MG a:CLA809 0.0 69.2 1.0
NB a:CLA809 2.0 69.2 1.0
ND a:CLA809 2.0 69.2 1.0
NA a:CLA809 2.1 69.2 1.0
NC a:CLA809 2.1 69.2 1.0
C4D a:CLA809 2.9 69.2 1.0
OE1 a:GLN90 3.0 72.2 1.0
C1B a:CLA809 3.0 69.2 1.0
C4A a:CLA809 3.0 69.2 1.0
C4B a:CLA809 3.1 69.2 1.0
C1C a:CLA809 3.1 69.2 1.0
C4C a:CLA809 3.1 69.2 1.0
C1A a:CLA809 3.1 69.2 1.0
C1D a:CLA809 3.2 69.2 1.0
CHB a:CLA809 3.4 69.2 1.0
CHC a:CLA809 3.4 69.2 1.0
CHA a:CLA809 3.5 69.2 1.0
CHD a:CLA809 3.5 69.2 1.0
CD a:GLN90 3.6 72.2 1.0
NE2 a:GLN90 3.7 72.2 1.0
C3 a:CLA823 4.2 68.3 1.0
C3D a:CLA809 4.3 69.2 1.0
C2B a:CLA809 4.3 69.2 1.0
C4 a:CLA823 4.3 68.3 1.0
C3B a:CLA809 4.3 69.2 1.0
C2C a:CLA809 4.3 69.2 1.0
C2D a:CLA809 4.4 69.2 1.0
C3C a:CLA809 4.4 69.2 1.0
C2 a:CLA823 4.4 68.3 1.0
C3A a:CLA809 4.4 69.2 1.0
C2A a:CLA809 4.4 69.2 1.0
O1A a:CLA809 4.5 69.2 1.0
C5 a:CLA823 4.6 68.3 1.0
C1 a:CLA823 4.7 68.3 1.0
O1A a:CLA823 4.9 68.3 1.0
CG a:GLN90 4.9 72.2 1.0
CBD a:CLA809 4.9 69.2 1.0

Magnesium binding site 10 out of 262 in 8jw0

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Magnesium binding site 10 out of 262 in the Psi-Acppci Supercomplex From Amphidinium Carterae


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Psi-Acppci Supercomplex From Amphidinium Carterae within 5.0Å range:
probe atom residue distance (Å) B Occ
a:Mg810

b:71.2
occ:1.00
MG a:CLA810 0.0 71.2 1.0
NB a:CLA810 2.0 71.2 1.0
ND a:CLA810 2.0 71.2 1.0
NC a:CLA810 2.1 71.2 1.0
NA a:CLA810 2.1 71.2 1.0
OE1 a:GLN98 2.8 70.8 1.0
C4D a:CLA810 2.9 71.2 1.0
C1B a:CLA810 3.0 71.2 1.0
C4A a:CLA810 3.0 71.2 1.0
C4B a:CLA810 3.1 71.2 1.0
C1C a:CLA810 3.1 71.2 1.0
C4C a:CLA810 3.1 71.2 1.0
C1D a:CLA810 3.2 71.2 1.0
C1A a:CLA810 3.2 71.2 1.0
CHB a:CLA810 3.4 71.2 1.0
CHC a:CLA810 3.4 71.2 1.0
CHA a:CLA810 3.5 71.2 1.0
CHD a:CLA810 3.5 71.2 1.0
CD a:GLN98 4.0 70.8 1.0
C3D a:CLA810 4.3 71.2 1.0
C2B a:CLA810 4.3 71.2 1.0
C3B a:CLA810 4.3 71.2 1.0
C2C a:CLA810 4.3 71.2 1.0
C2D a:CLA810 4.4 71.2 1.0
C3C a:CLA810 4.4 71.2 1.0
C3A a:CLA810 4.4 71.2 1.0
C2A a:CLA810 4.5 71.2 1.0
NE2 a:GLN98 4.5 70.8 1.0
C12 a:CLA823 4.7 68.3 1.0
C13 a:CLA823 4.7 68.3 1.0
CBD a:CLA810 4.9 71.2 1.0
CG2 a:ILE95 4.9 71.8 1.0
CBB a:CLA809 4.9 69.2 1.0

Reference:

X.Li, Z.Li, F.Wang, S.Zhao, C.Xu, Z.Mao, J.Duan, Y.Feng, Y.Yang, L.Shen, G.Wang, Y.Yang, L.J.Yu, M.Sang, G.Han, X.Wang, T.Kuang, J.R.Shen, W.Wang. Structures and Organizations of Psi-Acppci Supercomplexes From Red Tidal and Coral Symbiotic Photosynthetic Dinoflagellates. Proc.Natl.Acad.Sci.Usa V. 121 76121 2024.
ISSN: ESSN 1091-6490
PubMed: 38319970
DOI: 10.1073/PNAS.2315476121
Page generated: Fri Oct 4 13:40:57 2024

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