Magnesium in PDB 8kci: Atp-Bound HMRP5 Outward-Open

All present enzymatic activity of Atp-Bound HMRP5 Outward-Open:
7.6.2.2;

The binding sites of Magnesium atom in the Atp-Bound HMRP5 Outward-Open (pdb code 8kci). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Atp-Bound HMRP5 Outward-Open, PDB code: 8kci:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in the Atp-Bound HMRP5 Outward-Open


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Atp-Bound HMRP5 Outward-Open within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1603 b:65.1 occ:1.00 OE1 A:GLN630 2.0 59.0 1.0 CD A:GLN630 2.5 59.0 1.0 OG1 A:THR602 2.6 76.3 1.0 NE2 A:GLN630 2.9 59.0 1.0 CG2 A:THR602 3.0 76.3 1.0 CB A:THR602 3.4 76.3 1.0 OD2 A:ASP709 3.5 63.0 1.0 OD1 A:ASP709 3.5 63.0 1.0 CG A:GLN630 3.6 59.0 1.0 CG A:ASP709 3.8 63.0 1.0 CB A:GLN630 4.0 59.0 1.0 O1B A:ATP1601 4.3 101.0 1.0 CA A:THR602 4.5 76.3 1.0 O1G A:ATP1601 4.7 101.0 1.0 OD2 A:ASP710 4.8 70.0 1.0 O A:LYS601 4.9 90.7 1.0 OG A:SER1331 4.9 89.7 1.0

Magnesium binding site 2 out of 2 in the Atp-Bound HMRP5 Outward-Open


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Atp-Bound HMRP5 Outward-Open within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1604 b:70.8 occ:1.00 N A:SER1234 2.6 99.8 1.0 O2B A:ATP1602 2.7 86.3 1.0 CB A:SER1234 3.0 99.8 1.0 CA A:SER1234 3.2 99.8 1.0 C A:LYS1233 3.4 92.5 1.0 O A:LYS1233 3.4 92.5 1.0 NE2 A:GLN1275 3.7 98.9 1.0 O A:SER1234 3.8 99.8 1.0 C A:SER1234 4.0 99.8 1.0 OG A:SER1234 4.0 99.8 1.0 PB A:ATP1602 4.1 86.3 1.0 O2G A:ATP1602 4.2 86.3 1.0 O1B A:ATP1602 4.6 86.3 1.0 CD A:GLN1275 4.7 98.9 1.0 CA A:LYS1233 4.7 92.5 1.0 OD2 A:ASP1354 4.8 116.9 1.0 O3B A:ATP1602 4.9 86.3 1.0 O1A A:ATP1602 4.9 86.3 1.0

Y.Huang, C.Xue, R.Bu, C.Wu, J.Li, J.Zhang, J.Chen, Z.Shi, Y.Chen, Y.Wang, Z.Liu. Inhibition and Transport Mechanisms of the Abc Transporter HMRP5. Nat Commun V. 15 4811 2024.
ISSN: ESSN 2041-1723
PubMed: 38844452
DOI: 10.1038/S41467-024-49204-1