Atomistry » Magnesium » PDB 8ka1-8ogs » 8ogk
Atomistry »
  Magnesium »
    PDB 8ka1-8ogs »
      8ogk »

Magnesium in PDB 8ogk: Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso

Enzymatic activity of Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso

All present enzymatic activity of Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso:
2.7.7.85;

Protein crystallography data

The structure of Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso, PDB code: 8ogk was solved by T.B.Garbers, P.Neumann, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.58 / 1.18
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 118.65, 39.24, 67.98, 90, 94.99, 90
R / Rfree (%) 17.5 / 19.4

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso (pdb code 8ogk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso, PDB code: 8ogk:

Magnesium binding site 1 out of 1 in 8ogk

Go back to Magnesium Binding Sites List in 8ogk
Magnesium binding site 1 out of 1 in the Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:34.8
occ:1.00
O A:HOH485 1.9 43.7 1.0
O A:HOH471 2.0 49.2 1.0
O A:HOH401 2.0 43.9 1.0
O A:HOH408 2.1 47.4 1.0
O A:HOH406 2.2 37.7 1.0
NE2 A:HIS170 2.3 28.7 1.0
CE1 A:HIS170 3.2 28.9 1.0
CD2 A:HIS170 3.3 28.6 1.0
HE1 A:HIS170 3.4 34.6 1.0
HD2 A:HIS170 3.4 34.4 1.0
H A:ASN166 3.5 32.3 1.0
OD1 A:ASP171 4.0 35.5 1.0
OD1 A:ASN166 4.1 39.7 1.0
OD2 A:ASP171 4.2 33.4 1.0
N A:ASN166 4.3 26.9 1.0
HB3 A:PRO165 4.3 34.1 1.0
HA A:ASN166 4.4 35.2 1.0
HA A:PRO165 4.4 32.3 1.0
ND1 A:HIS170 4.4 27.7 1.0
CG A:HIS170 4.4 26.7 1.0
CG A:ASP171 4.5 33.2 1.0
HH22 A:ARG203 4.6 46.6 1.0
CA A:ASN166 4.9 29.4 1.0

Reference:

T.B.Garbers, P.Neumann, J.Wollenhaupt, M.Weiss, R.Ficner. Crystal Structure of Cdaa From Bacillus Subtilis Co-Crystallized with Dmso To Be Published.
Page generated: Fri Oct 4 14:43:24 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy