Magnesium in PDB 8ogw: Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02

Enzymatic activity of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02

All present enzymatic activity of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02:
2.7.7.85;

Protein crystallography data

The structure of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02, PDB code: 8ogw was solved by T.B.Garbers, P.Neumann, J.Wollenhaupt, M.S.Weiss, R.Ficner, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 42.69 / 1.17
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 118.87, 39.24, 68.17, 90, 95.31, 90
R / Rfree (%) 17.9 / 19.4

Other elements in 8ogw:

The structure of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02 also contains other interesting chemical elements:

Fluorine (F) 4 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02 (pdb code 8ogw). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02, PDB code: 8ogw:

Magnesium binding site 1 out of 1 in 8ogw

Go back to Magnesium Binding Sites List in 8ogw
Magnesium binding site 1 out of 1 in the Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X- Entry D02 within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg302

b:19.3
occ:1.00
O B:HOH525 2.1 19.2 1.0
O B:HOH462 2.1 26.5 1.0
O B:HOH504 2.4 22.2 1.0
HB2 B:GLU239 3.9 20.6 1.0
O B:HOH503 4.0 34.9 1.0
O B:HOH468 4.1 20.4 1.0
O B:ARG238 4.2 15.9 1.0
O B:HOH541 4.5 19.5 1.0
O B:HOH545 4.8 23.8 1.0
CB B:GLU239 4.9 17.0 1.0

Reference:

T.B.Garbers, P.Neumann, J.Wollenhaupt, M.S.Weiss, R.Ficner. Pandda Analysis Group Deposition -- Cdaa in Complex with Fragment F2X-Entry D02 To Be Published.
Page generated: Fri Oct 4 14:48:00 2024

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