Magnesium in PDB 8osf: Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
Enzymatic activity of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
All present enzymatic activity of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A:
6.6.1.1;
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
(pdb code 8osf). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the
Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A, PDB code: 8osf:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
Magnesium binding site 1 out
of 5 in 8osf
Go back to
Magnesium Binding Sites List in 8osf
Magnesium binding site 1 out
of 5 in the Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg402
b:100.6
occ:1.00
|
O1G
|
A:ATP401
|
2.1
|
103.6
|
1.0
|
PG
|
A:ATP401
|
3.5
|
103.6
|
1.0
|
CB
|
A:SER54
|
3.5
|
103.7
|
1.0
|
OG
|
A:SER54
|
3.6
|
103.7
|
1.0
|
O3B
|
A:ATP401
|
4.2
|
103.6
|
1.0
|
O2G
|
A:ATP401
|
4.3
|
103.6
|
1.0
|
O3G
|
A:ATP401
|
4.5
|
103.6
|
1.0
|
O2B
|
A:ATP401
|
4.6
|
103.6
|
1.0
|
OH
|
A:TYR151
|
4.8
|
117.9
|
1.0
|
O1A
|
A:ATP401
|
4.8
|
103.6
|
1.0
|
NH1
|
F:ARG210
|
4.9
|
160.5
|
1.0
|
|
Magnesium binding site 2 out
of 5 in 8osf
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Magnesium Binding Sites List in 8osf
Magnesium binding site 2 out
of 5 in the Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg402
b:95.5
occ:1.00
|
O1G
|
B:ATP401
|
2.1
|
92.0
|
1.0
|
O2B
|
B:ATP401
|
2.1
|
92.0
|
1.0
|
O3B
|
B:ATP401
|
2.2
|
92.0
|
1.0
|
PB
|
B:ATP401
|
2.5
|
92.0
|
1.0
|
O1A
|
B:ATP401
|
2.5
|
92.0
|
1.0
|
PG
|
B:ATP401
|
2.6
|
92.0
|
1.0
|
O3A
|
B:ATP401
|
2.9
|
92.0
|
1.0
|
PA
|
B:ATP401
|
3.1
|
92.0
|
1.0
|
CB
|
B:SER54
|
3.5
|
94.4
|
1.0
|
O2A
|
B:ATP401
|
3.6
|
92.0
|
1.0
|
O3G
|
B:ATP401
|
3.7
|
92.0
|
1.0
|
O2G
|
B:ATP401
|
3.7
|
92.0
|
1.0
|
O1B
|
B:ATP401
|
3.9
|
92.0
|
1.0
|
N
|
B:SER54
|
4.1
|
94.4
|
1.0
|
NH2
|
A:ARG210
|
4.2
|
109.5
|
1.0
|
OG
|
B:SER54
|
4.3
|
94.4
|
1.0
|
CA
|
B:SER54
|
4.4
|
94.4
|
1.0
|
O5'
|
B:ATP401
|
4.6
|
92.0
|
1.0
|
NZ
|
B:LYS53
|
4.6
|
94.0
|
1.0
|
CB
|
A:ALA171
|
4.9
|
121.2
|
1.0
|
|
Magnesium binding site 3 out
of 5 in 8osf
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Magnesium Binding Sites List in 8osf
Magnesium binding site 3 out
of 5 in the Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg402
b:63.8
occ:1.00
|
O1G
|
C:ATP401
|
2.1
|
85.7
|
1.0
|
OG
|
C:SER54
|
2.6
|
93.0
|
1.0
|
CB
|
C:SER54
|
2.7
|
93.0
|
1.0
|
O2B
|
C:ATP401
|
3.1
|
85.7
|
1.0
|
PG
|
C:ATP401
|
3.5
|
85.7
|
1.0
|
OD2
|
C:ASP153
|
3.9
|
123.7
|
1.0
|
O3B
|
C:ATP401
|
3.9
|
85.7
|
1.0
|
O1A
|
C:ATP401
|
4.1
|
85.7
|
1.0
|
PB
|
C:ATP401
|
4.1
|
85.7
|
1.0
|
CA
|
C:SER54
|
4.2
|
93.0
|
1.0
|
O3G
|
C:ATP401
|
4.3
|
85.7
|
1.0
|
NH2
|
B:ARG210
|
4.5
|
88.1
|
1.0
|
OD1
|
C:ASP153
|
4.6
|
123.7
|
1.0
|
O2G
|
C:ATP401
|
4.6
|
85.7
|
1.0
|
CG
|
C:ASP153
|
4.7
|
123.7
|
1.0
|
O3A
|
C:ATP401
|
4.8
|
85.7
|
1.0
|
O
|
C:LYS53
|
4.8
|
99.2
|
1.0
|
N
|
C:SER54
|
4.9
|
93.0
|
1.0
|
C
|
C:SER54
|
5.0
|
93.0
|
1.0
|
|
Magnesium binding site 4 out
of 5 in 8osf
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Magnesium Binding Sites List in 8osf
Magnesium binding site 4 out
of 5 in the Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg402
b:86.4
occ:1.00
|
O1G
|
D:ATP401
|
2.0
|
104.9
|
1.0
|
CB
|
D:SER54
|
3.1
|
101.2
|
1.0
|
O1A
|
D:ATP401
|
3.2
|
104.9
|
1.0
|
OG
|
D:SER54
|
3.3
|
101.2
|
1.0
|
PG
|
D:ATP401
|
3.3
|
104.9
|
1.0
|
O3G
|
D:ATP401
|
3.7
|
104.9
|
1.0
|
O3A
|
D:ATP401
|
3.8
|
104.9
|
1.0
|
OD2
|
C:ASP168
|
4.0
|
166.9
|
1.0
|
PA
|
D:ATP401
|
4.0
|
104.9
|
1.0
|
O3B
|
D:ATP401
|
4.2
|
104.9
|
1.0
|
O2G
|
D:ATP401
|
4.5
|
104.9
|
1.0
|
O2A
|
D:ATP401
|
4.6
|
104.9
|
1.0
|
PB
|
D:ATP401
|
4.6
|
104.9
|
1.0
|
CA
|
D:SER54
|
4.6
|
101.2
|
1.0
|
O2B
|
D:ATP401
|
4.7
|
104.9
|
1.0
|
OD2
|
D:ASP153
|
4.7
|
169.3
|
1.0
|
NH2
|
C:ARG210
|
4.9
|
118.7
|
1.0
|
CG
|
C:ASP168
|
4.9
|
166.9
|
1.0
|
|
Magnesium binding site 5 out
of 5 in 8osf
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Magnesium Binding Sites List in 8osf
Magnesium binding site 5 out
of 5 in the Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Aaa+ Motor Subunit Chli of Magnesium Chelatase, Hexamer Conformation A within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg402
b:106.1
occ:1.00
|
O2B
|
E:ATP401
|
2.1
|
106.0
|
1.0
|
O1G
|
E:ATP401
|
2.1
|
106.0
|
1.0
|
PB
|
E:ATP401
|
3.0
|
106.0
|
1.0
|
PG
|
E:ATP401
|
3.1
|
106.0
|
1.0
|
O3B
|
E:ATP401
|
3.1
|
106.0
|
1.0
|
OG
|
E:SER54
|
3.6
|
105.3
|
1.0
|
O1B
|
E:ATP401
|
3.7
|
106.0
|
1.0
|
NH1
|
D:ARG210
|
3.8
|
146.3
|
1.0
|
O3G
|
E:ATP401
|
4.0
|
106.0
|
1.0
|
CB
|
E:SER54
|
4.0
|
105.3
|
1.0
|
O2G
|
E:ATP401
|
4.3
|
106.0
|
1.0
|
O3A
|
E:ATP401
|
4.4
|
106.0
|
1.0
|
OH
|
E:TYR151
|
4.8
|
127.7
|
1.0
|
N
|
E:SER54
|
4.8
|
105.3
|
1.0
|
CZ
|
D:ARG210
|
4.9
|
146.3
|
1.0
|
|
Reference:
D.Shvarev,
A.I.Scholz,
A.Moeller.
Conformational Variability of Cyanobacterial Chli, the Aaa+ Motor of Magnesium Chelatase Involved in Chlorophyll Biosynthesis To Be Published.
Page generated: Fri Oct 4 15:01:45 2024
|