Magnesium in PDB 8ouk: Arf Gtpase From the Asgard Hodarchaea : HODARFR1 Bound to Gtp

The structure of Arf Gtpase From the Asgard Hodarchaea : HODARFR1 Bound to Gtp, PDB code: 8ouk was solved by J.Menetrey, C.Jackson, J.Dacks, M.Elias, R.Vargova, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	18.72 / 1.80
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	59.12, 59.12, 119.73, 90, 90, 90
R / Rfree (%)	19.2 / 21.5

The binding sites of Magnesium atom in the Arf Gtpase From the Asgard Hodarchaea : HODARFR1 Bound to Gtp (pdb code 8ouk). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Arf Gtpase From the Asgard Hodarchaea : HODARFR1 Bound to Gtp, PDB code: 8ouk:

Magnesium binding site 1 out of 1 in the Arf Gtpase From the Asgard Hodarchaea : HODARFR1 Bound to Gtp


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Arf Gtpase From the Asgard Hodarchaea : HODARFR1 Bound to Gtp within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg202 b:30.1 occ:1.00 O2B A:GTP201 2.0 31.1 1.0 O3G A:GTP201 2.1 30.4 1.0 O A:HOH318 2.1 33.3 1.0 OG A:SER31 2.1 31.2 1.0 O A:HOH303 2.1 30.0 1.0 OG1 A:THR49 2.2 32.2 1.0 CB A:THR49 3.1 32.8 1.0 CB A:SER31 3.1 31.6 1.0 PG A:GTP201 3.2 31.3 1.0 PB A:GTP201 3.2 31.5 1.0 O3B A:GTP201 3.4 31.6 1.0 O1G A:GTP201 3.6 32.9 1.0 N A:THR49 3.8 32.8 1.0 N A:SER31 4.0 29.7 1.0 O1A A:GTP201 4.0 33.0 1.0 CA A:THR49 4.0 31.9 1.0 OD1 A:ASP68 4.1 32.0 1.0 OD2 A:ASP68 4.1 34.3 1.0 CA A:SER31 4.2 30.9 1.0 O3A A:GTP201 4.2 33.0 1.0 CG2 A:THR49 4.2 33.1 1.0 O1B A:GTP201 4.3 31.2 1.0 O A:HOH320 4.3 35.2 1.0 O2G A:GTP201 4.4 31.9 1.0 PA A:GTP201 4.5 33.7 1.0 O2A A:GTP201 4.5 32.1 1.0 O A:LYS47 4.5 34.0 1.0 CG A:ASP68 4.5 33.3 1.0 C A:ARG48 4.7 34.0 1.0 ND2 A:ASN53 4.8 35.6 1.0

J.Menetrey, C.Jackson. Arf Family Gtpases Are Present in Asgard Archaea To Be Published.