Magnesium in PDB 8peu: Rho-Atpgs-Psu Complex I
Magnesium Binding Sites:
The binding sites of Magnesium atom in the Rho-Atpgs-Psu Complex I
(pdb code 8peu). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 10 binding sites of Magnesium where determined in the
Rho-Atpgs-Psu Complex I, PDB code: 8peu:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 10 in 8peu
Go back to
Magnesium Binding Sites List in 8peu
Magnesium binding site 1 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg502
b:185.7
occ:1.00
|
OG1
|
A:THR185
|
2.1
|
139.4
|
1.0
|
O1B
|
A:AGS501
|
2.1
|
179.8
|
1.0
|
O2G
|
A:AGS501
|
2.1
|
182.8
|
1.0
|
PG
|
A:AGS501
|
3.2
|
195.5
|
1.0
|
PB
|
A:AGS501
|
3.2
|
193.0
|
1.0
|
O3B
|
A:AGS501
|
3.4
|
185.7
|
1.0
|
CB
|
A:THR185
|
3.4
|
139.4
|
1.0
|
N
|
A:THR185
|
3.7
|
133.2
|
1.0
|
O2A
|
A:AGS501
|
3.8
|
176.0
|
1.0
|
CA
|
A:THR185
|
4.0
|
138.0
|
1.0
|
NZ
|
A:LYS184
|
4.1
|
144.3
|
1.0
|
S1G
|
A:AGS501
|
4.2
|
189.4
|
1.0
|
CE
|
A:LYS184
|
4.3
|
141.1
|
1.0
|
O2B
|
A:AGS501
|
4.3
|
176.9
|
1.0
|
O3A
|
A:AGS501
|
4.3
|
182.4
|
1.0
|
PA
|
A:AGS501
|
4.4
|
186.3
|
1.0
|
CG2
|
A:THR185
|
4.5
|
142.3
|
1.0
|
O1A
|
A:AGS501
|
4.5
|
181.6
|
1.0
|
O3G
|
A:AGS501
|
4.5
|
181.8
|
1.0
|
CB
|
A:LYS184
|
4.6
|
124.9
|
1.0
|
NH1
|
A:ARG212
|
4.6
|
142.8
|
1.0
|
C
|
A:LYS184
|
4.6
|
132.4
|
1.0
|
OE2
|
A:GLU215
|
4.7
|
116.7
|
1.0
|
OE1
|
A:GLU215
|
4.8
|
120.3
|
1.0
|
N
|
A:LYS184
|
4.8
|
129.4
|
1.0
|
CA
|
A:LYS184
|
4.9
|
128.1
|
1.0
|
CD
|
A:GLU215
|
5.0
|
117.5
|
1.0
|
|
Magnesium binding site 2 out
of 10 in 8peu
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Magnesium Binding Sites List in 8peu
Magnesium binding site 2 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg502
b:209.6
occ:1.00
|
O1B
|
B:AGS501
|
2.1
|
198.8
|
1.0
|
OG1
|
B:THR185
|
2.1
|
149.0
|
1.0
|
O2G
|
B:AGS501
|
2.1
|
198.8
|
1.0
|
PB
|
B:AGS501
|
3.1
|
203.1
|
1.0
|
CB
|
B:THR185
|
3.3
|
144.6
|
1.0
|
PG
|
B:AGS501
|
3.3
|
205.1
|
1.0
|
O3B
|
B:AGS501
|
3.4
|
198.9
|
1.0
|
O2B
|
B:AGS501
|
3.6
|
195.9
|
1.0
|
NZ
|
B:LYS184
|
3.9
|
133.6
|
1.0
|
N
|
B:THR185
|
4.2
|
142.3
|
1.0
|
CG2
|
B:THR185
|
4.2
|
144.0
|
1.0
|
O3G
|
B:AGS501
|
4.2
|
200.4
|
1.0
|
CA
|
B:THR185
|
4.3
|
145.8
|
1.0
|
CE
|
B:LYS184
|
4.4
|
130.2
|
1.0
|
CG
|
B:LYS184
|
4.4
|
128.3
|
1.0
|
O3A
|
B:AGS501
|
4.5
|
199.2
|
1.0
|
NH2
|
B:ARG212
|
4.6
|
113.4
|
1.0
|
NH1
|
B:ARG212
|
4.6
|
108.9
|
1.0
|
O1A
|
B:AGS501
|
4.7
|
198.9
|
1.0
|
S1G
|
B:AGS501
|
4.7
|
205.3
|
1.0
|
OE2
|
B:GLU211
|
4.8
|
131.4
|
1.0
|
NH1
|
C:ARG366
|
4.8
|
150.2
|
1.0
|
PA
|
B:AGS501
|
5.0
|
199.1
|
1.0
|
O2A
|
B:AGS501
|
5.0
|
194.2
|
1.0
|
|
Magnesium binding site 3 out
of 10 in 8peu
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Magnesium Binding Sites List in 8peu
Magnesium binding site 3 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg502
b:227.5
occ:1.00
|
OG1
|
C:THR185
|
2.1
|
146.4
|
1.0
|
O1B
|
C:AGS501
|
2.1
|
190.5
|
1.0
|
O2G
|
C:AGS501
|
2.1
|
193.4
|
1.0
|
O3G
|
C:AGS501
|
2.6
|
194.3
|
1.0
|
PG
|
C:AGS501
|
2.6
|
199.6
|
1.0
|
PB
|
C:AGS501
|
2.9
|
196.1
|
1.0
|
O3B
|
C:AGS501
|
2.9
|
193.5
|
1.0
|
CB
|
C:THR185
|
3.2
|
139.9
|
1.0
|
O1A
|
C:AGS501
|
3.2
|
190.7
|
1.0
|
O3A
|
C:AGS501
|
3.6
|
192.5
|
1.0
|
PA
|
C:AGS501
|
3.7
|
190.9
|
1.0
|
O2A
|
C:AGS501
|
3.9
|
183.3
|
1.0
|
CG2
|
C:THR185
|
4.0
|
137.2
|
1.0
|
O2B
|
C:AGS501
|
4.3
|
188.0
|
1.0
|
NZ
|
C:LYS184
|
4.3
|
157.1
|
1.0
|
N
|
C:THR185
|
4.3
|
139.4
|
1.0
|
CA
|
C:THR185
|
4.3
|
142.5
|
1.0
|
S1G
|
C:AGS501
|
4.5
|
194.4
|
1.0
|
NH2
|
C:ARG212
|
4.6
|
129.6
|
1.0
|
NH1
|
C:ARG212
|
4.7
|
125.1
|
1.0
|
CG
|
C:LYS184
|
4.8
|
145.2
|
1.0
|
CE
|
C:LYS184
|
4.8
|
150.5
|
1.0
|
OE2
|
C:GLU211
|
4.9
|
141.8
|
1.0
|
|
Magnesium binding site 4 out
of 10 in 8peu
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Magnesium Binding Sites List in 8peu
Magnesium binding site 4 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg502
b:217.1
occ:1.00
|
OG1
|
D:THR185
|
2.1
|
146.7
|
1.0
|
O2G
|
D:AGS501
|
2.1
|
178.5
|
1.0
|
O1B
|
D:AGS501
|
2.1
|
183.7
|
1.0
|
NH2
|
E:ARG366
|
2.5
|
142.9
|
1.0
|
CB
|
D:THR185
|
3.2
|
138.1
|
1.0
|
PB
|
D:AGS501
|
3.4
|
186.0
|
1.0
|
PG
|
D:AGS501
|
3.5
|
182.0
|
1.0
|
CG2
|
D:THR185
|
3.5
|
136.6
|
1.0
|
CZ
|
E:ARG366
|
3.5
|
145.6
|
1.0
|
O3B
|
D:AGS501
|
3.8
|
180.1
|
1.0
|
OE2
|
D:GLU211
|
4.0
|
148.4
|
1.0
|
O2B
|
D:AGS501
|
4.2
|
179.1
|
1.0
|
NH1
|
E:ARG366
|
4.2
|
139.6
|
1.0
|
NE
|
E:ARG366
|
4.3
|
148.9
|
1.0
|
O3G
|
D:AGS501
|
4.3
|
177.1
|
1.0
|
CA
|
D:THR185
|
4.4
|
136.3
|
1.0
|
O3A
|
D:AGS501
|
4.6
|
176.5
|
1.0
|
NH1
|
D:ARG212
|
4.6
|
130.3
|
1.0
|
O1A
|
D:AGS501
|
4.7
|
174.4
|
1.0
|
N
|
D:THR185
|
4.8
|
136.8
|
1.0
|
S1G
|
D:AGS501
|
4.8
|
184.8
|
1.0
|
|
Magnesium binding site 5 out
of 10 in 8peu
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Magnesium Binding Sites List in 8peu
Magnesium binding site 5 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg502
b:254.5
occ:1.00
|
OG1
|
E:THR185
|
2.1
|
189.3
|
1.0
|
O2G
|
E:AGS501
|
2.1
|
231.5
|
1.0
|
O1B
|
E:AGS501
|
2.1
|
231.2
|
1.0
|
O3B
|
E:AGS501
|
2.4
|
233.6
|
1.0
|
PB
|
E:AGS501
|
2.7
|
237.9
|
1.0
|
PG
|
E:AGS501
|
2.7
|
239.1
|
1.0
|
CB
|
E:THR185
|
3.3
|
186.7
|
1.0
|
NZ
|
E:LYS184
|
3.6
|
180.2
|
1.0
|
O3A
|
E:AGS501
|
3.7
|
233.6
|
1.0
|
O3G
|
E:AGS501
|
3.7
|
233.1
|
1.0
|
O2A
|
E:AGS501
|
3.8
|
233.2
|
1.0
|
O2B
|
E:AGS501
|
3.9
|
230.7
|
1.0
|
N
|
E:THR185
|
4.0
|
184.6
|
1.0
|
O1A
|
E:AGS501
|
4.0
|
230.6
|
1.0
|
CG
|
E:LYS184
|
4.1
|
176.2
|
1.0
|
PA
|
E:AGS501
|
4.1
|
237.9
|
1.0
|
CE
|
E:LYS184
|
4.2
|
176.7
|
1.0
|
CA
|
E:THR185
|
4.2
|
185.9
|
1.0
|
S1G
|
E:AGS501
|
4.2
|
232.8
|
1.0
|
CG2
|
E:THR185
|
4.3
|
186.0
|
1.0
|
NH1
|
F:ARG366
|
4.7
|
128.0
|
1.0
|
CD
|
E:LYS184
|
4.8
|
174.1
|
1.0
|
|
Magnesium binding site 6 out
of 10 in 8peu
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Magnesium Binding Sites List in 8peu
Magnesium binding site 6 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Mg502
b:216.4
occ:1.00
|
O1B
|
I:AGS501
|
2.1
|
191.7
|
1.0
|
O2G
|
I:AGS501
|
2.1
|
192.8
|
1.0
|
OG1
|
I:THR185
|
2.1
|
143.6
|
1.0
|
PG
|
I:AGS501
|
3.1
|
197.1
|
1.0
|
PB
|
I:AGS501
|
3.1
|
194.2
|
1.0
|
O3B
|
I:AGS501
|
3.2
|
193.3
|
1.0
|
CB
|
I:THR185
|
3.4
|
141.2
|
1.0
|
CG
|
I:LYS184
|
3.8
|
120.9
|
1.0
|
S1G
|
I:AGS501
|
3.9
|
193.7
|
1.0
|
N
|
I:THR185
|
3.9
|
136.4
|
1.0
|
O2B
|
I:AGS501
|
3.9
|
189.7
|
1.0
|
CA
|
I:THR185
|
4.2
|
138.5
|
1.0
|
O3A
|
I:AGS501
|
4.4
|
190.2
|
1.0
|
CG2
|
I:THR185
|
4.5
|
140.9
|
1.0
|
O3G
|
I:AGS501
|
4.5
|
194.0
|
1.0
|
CD
|
I:LYS184
|
4.5
|
124.1
|
1.0
|
O1A
|
I:AGS501
|
4.6
|
190.7
|
1.0
|
O2A
|
I:AGS501
|
4.6
|
189.4
|
1.0
|
PA
|
I:AGS501
|
4.8
|
189.7
|
1.0
|
OE2
|
I:GLU211
|
4.8
|
118.2
|
1.0
|
C
|
I:LYS184
|
4.9
|
124.6
|
1.0
|
NZ
|
I:LYS184
|
4.9
|
128.5
|
1.0
|
|
Magnesium binding site 7 out
of 10 in 8peu
Go back to
Magnesium Binding Sites List in 8peu
Magnesium binding site 7 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Mg502
b:212.8
occ:1.00
|
O1B
|
J:AGS501
|
2.1
|
197.8
|
1.0
|
O2G
|
J:AGS501
|
2.1
|
194.9
|
1.0
|
OG1
|
J:THR185
|
2.1
|
159.1
|
1.0
|
O3B
|
J:AGS501
|
2.7
|
195.6
|
1.0
|
PB
|
J:AGS501
|
2.8
|
200.9
|
1.0
|
PG
|
J:AGS501
|
2.9
|
198.6
|
1.0
|
CB
|
J:THR185
|
3.5
|
154.2
|
1.0
|
O2B
|
J:AGS501
|
3.8
|
191.2
|
1.0
|
NZ
|
J:LYS184
|
4.0
|
147.4
|
1.0
|
O3G
|
J:AGS501
|
4.0
|
196.2
|
1.0
|
O3A
|
J:AGS501
|
4.1
|
196.0
|
1.0
|
CG2
|
J:THR185
|
4.2
|
150.2
|
1.0
|
OE2
|
J:GLU215
|
4.2
|
135.4
|
1.0
|
NH1
|
J:ARG212
|
4.3
|
123.8
|
1.0
|
S1G
|
J:AGS501
|
4.4
|
201.8
|
1.0
|
CE
|
J:LYS184
|
4.5
|
144.8
|
1.0
|
CA
|
J:THR185
|
4.5
|
155.0
|
1.0
|
N
|
J:THR185
|
4.6
|
151.5
|
1.0
|
CG
|
J:LYS184
|
4.7
|
140.1
|
1.0
|
O1A
|
J:AGS501
|
4.8
|
195.1
|
1.0
|
OE2
|
J:GLU211
|
4.8
|
145.1
|
1.0
|
CD
|
J:GLU215
|
4.9
|
134.8
|
1.0
|
PA
|
J:AGS501
|
5.0
|
197.2
|
1.0
|
|
Magnesium binding site 8 out
of 10 in 8peu
Go back to
Magnesium Binding Sites List in 8peu
Magnesium binding site 8 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
K:Mg502
b:217.5
occ:1.00
|
OG1
|
K:THR185
|
2.1
|
145.5
|
1.0
|
O2G
|
K:AGS501
|
2.1
|
205.1
|
1.0
|
O1B
|
K:AGS501
|
2.1
|
205.3
|
1.0
|
O1A
|
K:AGS501
|
2.9
|
205.4
|
1.0
|
PB
|
K:AGS501
|
3.2
|
214.2
|
1.0
|
PG
|
K:AGS501
|
3.2
|
214.0
|
1.0
|
CB
|
K:THR185
|
3.4
|
138.9
|
1.0
|
O3B
|
K:AGS501
|
3.4
|
209.2
|
1.0
|
PA
|
K:AGS501
|
3.8
|
204.2
|
1.0
|
O3G
|
K:AGS501
|
3.8
|
205.4
|
1.0
|
NZ
|
K:LYS184
|
3.9
|
152.6
|
1.0
|
O3A
|
K:AGS501
|
3.9
|
205.7
|
1.0
|
NH2
|
K:ARG212
|
4.0
|
132.1
|
1.0
|
CG2
|
K:THR185
|
4.1
|
140.6
|
1.0
|
O2A
|
K:AGS501
|
4.1
|
198.0
|
1.0
|
CA
|
K:THR185
|
4.4
|
139.7
|
1.0
|
O2B
|
K:AGS501
|
4.5
|
206.7
|
1.0
|
N
|
K:THR185
|
4.5
|
135.7
|
1.0
|
S1G
|
K:AGS501
|
4.9
|
218.7
|
1.0
|
NH1
|
L:ARG366
|
4.9
|
140.1
|
1.0
|
OE2
|
K:GLU211
|
4.9
|
155.9
|
1.0
|
NH1
|
K:ARG212
|
4.9
|
125.7
|
1.0
|
CZ
|
K:ARG212
|
4.9
|
128.0
|
1.0
|
CE
|
K:LYS184
|
4.9
|
148.3
|
1.0
|
|
Magnesium binding site 9 out
of 10 in 8peu
Go back to
Magnesium Binding Sites List in 8peu
Magnesium binding site 9 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
L:Mg502
b:215.1
occ:1.00
|
OG1
|
L:THR185
|
2.1
|
150.1
|
1.0
|
O1B
|
L:AGS501
|
2.1
|
195.1
|
1.0
|
O2G
|
L:AGS501
|
2.1
|
197.9
|
1.0
|
PG
|
L:AGS501
|
3.2
|
201.0
|
1.0
|
CB
|
L:THR185
|
3.3
|
146.6
|
1.0
|
PB
|
L:AGS501
|
3.3
|
198.4
|
1.0
|
O3B
|
L:AGS501
|
3.5
|
196.4
|
1.0
|
N
|
L:THR185
|
3.7
|
143.5
|
1.0
|
OE2
|
L:GLU215
|
3.8
|
160.7
|
1.0
|
O3G
|
L:AGS501
|
3.9
|
195.9
|
1.0
|
O1A
|
L:AGS501
|
3.9
|
194.3
|
1.0
|
CA
|
L:THR185
|
4.0
|
147.1
|
1.0
|
O2A
|
L:AGS501
|
4.2
|
192.8
|
1.0
|
O3A
|
L:AGS501
|
4.3
|
194.9
|
1.0
|
O2B
|
L:AGS501
|
4.3
|
193.8
|
1.0
|
NH1
|
L:ARG212
|
4.3
|
151.0
|
1.0
|
PA
|
L:AGS501
|
4.3
|
196.0
|
1.0
|
CG2
|
L:THR185
|
4.4
|
148.5
|
1.0
|
OE2
|
L:GLU211
|
4.6
|
172.4
|
1.0
|
CD
|
L:GLU215
|
4.7
|
158.7
|
1.0
|
CB
|
L:LYS184
|
4.8
|
147.4
|
1.0
|
C
|
L:LYS184
|
4.8
|
146.0
|
1.0
|
S1G
|
L:AGS501
|
4.9
|
198.0
|
1.0
|
NH2
|
L:ARG212
|
4.9
|
151.1
|
1.0
|
N
|
L:LYS184
|
4.9
|
146.8
|
1.0
|
OD2
|
L:ASP265
|
5.0
|
157.1
|
1.0
|
CE
|
L:LYS184
|
5.0
|
149.8
|
1.0
|
|
Magnesium binding site 10 out
of 10 in 8peu
Go back to
Magnesium Binding Sites List in 8peu
Magnesium binding site 10 out
of 10 in the Rho-Atpgs-Psu Complex I
Mono view
Stereo pair view
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
M:Mg502
b:248.5
occ:1.00
|
OG1
|
M:THR185
|
2.1
|
189.3
|
1.0
|
O1B
|
M:AGS501
|
2.1
|
241.1
|
1.0
|
O2G
|
M:AGS501
|
2.1
|
242.5
|
1.0
|
PB
|
M:AGS501
|
3.0
|
242.4
|
1.0
|
O3B
|
M:AGS501
|
3.1
|
242.7
|
1.0
|
PG
|
M:AGS501
|
3.1
|
244.5
|
1.0
|
CB
|
M:THR185
|
3.2
|
188.7
|
1.0
|
NZ
|
M:LYS184
|
3.4
|
199.3
|
1.0
|
N
|
M:THR185
|
3.5
|
189.3
|
1.0
|
CG
|
M:LYS184
|
3.5
|
198.8
|
1.0
|
O2B
|
M:AGS501
|
3.7
|
240.4
|
1.0
|
CE
|
M:LYS184
|
3.8
|
198.3
|
1.0
|
CA
|
M:THR185
|
3.9
|
188.6
|
1.0
|
O3G
|
M:AGS501
|
4.1
|
242.9
|
1.0
|
CD
|
M:LYS184
|
4.3
|
197.6
|
1.0
|
O2A
|
M:AGS501
|
4.3
|
241.1
|
1.0
|
CG2
|
M:THR185
|
4.4
|
188.2
|
1.0
|
O3A
|
M:AGS501
|
4.4
|
242.3
|
1.0
|
C
|
M:LYS184
|
4.6
|
197.8
|
1.0
|
S1G
|
M:AGS501
|
4.6
|
243.9
|
1.0
|
N
|
M:LYS184
|
4.6
|
198.9
|
1.0
|
CB
|
M:LYS184
|
4.8
|
198.6
|
1.0
|
OD1
|
M:ASP265
|
4.8
|
174.0
|
1.0
|
CA
|
M:LYS184
|
4.9
|
198.2
|
1.0
|
PA
|
M:AGS501
|
4.9
|
242.8
|
1.0
|
NH2
|
M:ARG212
|
5.0
|
190.3
|
1.0
|
|
Reference:
D.Gjorgjevikj,
M.C.Wahl,
T.Hilal,
B.Loll.
Rho-Atpgs-Psu Complex I To Be Published.
Page generated: Fri Oct 4 16:00:44 2024
|