Magnesium in PDB 8peu: Rho-Atpgs-Psu Complex I

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Rho-Atpgs-Psu Complex I (pdb code 8peu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 10 binding sites of Magnesium where determined in the Rho-Atpgs-Psu Complex I, PDB code: 8peu:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;

Magnesium binding site 1 out of 10 in 8peu

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Magnesium binding site 1 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg502

b:185.7
occ:1.00
OG1 A:THR185 2.1 139.4 1.0
O1B A:AGS501 2.1 179.8 1.0
O2G A:AGS501 2.1 182.8 1.0
PG A:AGS501 3.2 195.5 1.0
PB A:AGS501 3.2 193.0 1.0
O3B A:AGS501 3.4 185.7 1.0
CB A:THR185 3.4 139.4 1.0
N A:THR185 3.7 133.2 1.0
O2A A:AGS501 3.8 176.0 1.0
CA A:THR185 4.0 138.0 1.0
NZ A:LYS184 4.1 144.3 1.0
S1G A:AGS501 4.2 189.4 1.0
CE A:LYS184 4.3 141.1 1.0
O2B A:AGS501 4.3 176.9 1.0
O3A A:AGS501 4.3 182.4 1.0
PA A:AGS501 4.4 186.3 1.0
CG2 A:THR185 4.5 142.3 1.0
O1A A:AGS501 4.5 181.6 1.0
O3G A:AGS501 4.5 181.8 1.0
CB A:LYS184 4.6 124.9 1.0
NH1 A:ARG212 4.6 142.8 1.0
C A:LYS184 4.6 132.4 1.0
OE2 A:GLU215 4.7 116.7 1.0
OE1 A:GLU215 4.8 120.3 1.0
N A:LYS184 4.8 129.4 1.0
CA A:LYS184 4.9 128.1 1.0
CD A:GLU215 5.0 117.5 1.0

Magnesium binding site 2 out of 10 in 8peu

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Magnesium binding site 2 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg502

b:209.6
occ:1.00
O1B B:AGS501 2.1 198.8 1.0
OG1 B:THR185 2.1 149.0 1.0
O2G B:AGS501 2.1 198.8 1.0
PB B:AGS501 3.1 203.1 1.0
CB B:THR185 3.3 144.6 1.0
PG B:AGS501 3.3 205.1 1.0
O3B B:AGS501 3.4 198.9 1.0
O2B B:AGS501 3.6 195.9 1.0
NZ B:LYS184 3.9 133.6 1.0
N B:THR185 4.2 142.3 1.0
CG2 B:THR185 4.2 144.0 1.0
O3G B:AGS501 4.2 200.4 1.0
CA B:THR185 4.3 145.8 1.0
CE B:LYS184 4.4 130.2 1.0
CG B:LYS184 4.4 128.3 1.0
O3A B:AGS501 4.5 199.2 1.0
NH2 B:ARG212 4.6 113.4 1.0
NH1 B:ARG212 4.6 108.9 1.0
O1A B:AGS501 4.7 198.9 1.0
S1G B:AGS501 4.7 205.3 1.0
OE2 B:GLU211 4.8 131.4 1.0
NH1 C:ARG366 4.8 150.2 1.0
PA B:AGS501 5.0 199.1 1.0
O2A B:AGS501 5.0 194.2 1.0

Magnesium binding site 3 out of 10 in 8peu

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Magnesium binding site 3 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
C:Mg502

b:227.5
occ:1.00
OG1 C:THR185 2.1 146.4 1.0
O1B C:AGS501 2.1 190.5 1.0
O2G C:AGS501 2.1 193.4 1.0
O3G C:AGS501 2.6 194.3 1.0
PG C:AGS501 2.6 199.6 1.0
PB C:AGS501 2.9 196.1 1.0
O3B C:AGS501 2.9 193.5 1.0
CB C:THR185 3.2 139.9 1.0
O1A C:AGS501 3.2 190.7 1.0
O3A C:AGS501 3.6 192.5 1.0
PA C:AGS501 3.7 190.9 1.0
O2A C:AGS501 3.9 183.3 1.0
CG2 C:THR185 4.0 137.2 1.0
O2B C:AGS501 4.3 188.0 1.0
NZ C:LYS184 4.3 157.1 1.0
N C:THR185 4.3 139.4 1.0
CA C:THR185 4.3 142.5 1.0
S1G C:AGS501 4.5 194.4 1.0
NH2 C:ARG212 4.6 129.6 1.0
NH1 C:ARG212 4.7 125.1 1.0
CG C:LYS184 4.8 145.2 1.0
CE C:LYS184 4.8 150.5 1.0
OE2 C:GLU211 4.9 141.8 1.0

Magnesium binding site 4 out of 10 in 8peu

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Magnesium binding site 4 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
D:Mg502

b:217.1
occ:1.00
OG1 D:THR185 2.1 146.7 1.0
O2G D:AGS501 2.1 178.5 1.0
O1B D:AGS501 2.1 183.7 1.0
NH2 E:ARG366 2.5 142.9 1.0
CB D:THR185 3.2 138.1 1.0
PB D:AGS501 3.4 186.0 1.0
PG D:AGS501 3.5 182.0 1.0
CG2 D:THR185 3.5 136.6 1.0
CZ E:ARG366 3.5 145.6 1.0
O3B D:AGS501 3.8 180.1 1.0
OE2 D:GLU211 4.0 148.4 1.0
O2B D:AGS501 4.2 179.1 1.0
NH1 E:ARG366 4.2 139.6 1.0
NE E:ARG366 4.3 148.9 1.0
O3G D:AGS501 4.3 177.1 1.0
CA D:THR185 4.4 136.3 1.0
O3A D:AGS501 4.6 176.5 1.0
NH1 D:ARG212 4.6 130.3 1.0
O1A D:AGS501 4.7 174.4 1.0
N D:THR185 4.8 136.8 1.0
S1G D:AGS501 4.8 184.8 1.0

Magnesium binding site 5 out of 10 in 8peu

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Magnesium binding site 5 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Mg502

b:254.5
occ:1.00
OG1 E:THR185 2.1 189.3 1.0
O2G E:AGS501 2.1 231.5 1.0
O1B E:AGS501 2.1 231.2 1.0
O3B E:AGS501 2.4 233.6 1.0
PB E:AGS501 2.7 237.9 1.0
PG E:AGS501 2.7 239.1 1.0
CB E:THR185 3.3 186.7 1.0
NZ E:LYS184 3.6 180.2 1.0
O3A E:AGS501 3.7 233.6 1.0
O3G E:AGS501 3.7 233.1 1.0
O2A E:AGS501 3.8 233.2 1.0
O2B E:AGS501 3.9 230.7 1.0
N E:THR185 4.0 184.6 1.0
O1A E:AGS501 4.0 230.6 1.0
CG E:LYS184 4.1 176.2 1.0
PA E:AGS501 4.1 237.9 1.0
CE E:LYS184 4.2 176.7 1.0
CA E:THR185 4.2 185.9 1.0
S1G E:AGS501 4.2 232.8 1.0
CG2 E:THR185 4.3 186.0 1.0
NH1 F:ARG366 4.7 128.0 1.0
CD E:LYS184 4.8 174.1 1.0

Magnesium binding site 6 out of 10 in 8peu

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Magnesium binding site 6 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 6 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
I:Mg502

b:216.4
occ:1.00
O1B I:AGS501 2.1 191.7 1.0
O2G I:AGS501 2.1 192.8 1.0
OG1 I:THR185 2.1 143.6 1.0
PG I:AGS501 3.1 197.1 1.0
PB I:AGS501 3.1 194.2 1.0
O3B I:AGS501 3.2 193.3 1.0
CB I:THR185 3.4 141.2 1.0
CG I:LYS184 3.8 120.9 1.0
S1G I:AGS501 3.9 193.7 1.0
N I:THR185 3.9 136.4 1.0
O2B I:AGS501 3.9 189.7 1.0
CA I:THR185 4.2 138.5 1.0
O3A I:AGS501 4.4 190.2 1.0
CG2 I:THR185 4.5 140.9 1.0
O3G I:AGS501 4.5 194.0 1.0
CD I:LYS184 4.5 124.1 1.0
O1A I:AGS501 4.6 190.7 1.0
O2A I:AGS501 4.6 189.4 1.0
PA I:AGS501 4.8 189.7 1.0
OE2 I:GLU211 4.8 118.2 1.0
C I:LYS184 4.9 124.6 1.0
NZ I:LYS184 4.9 128.5 1.0

Magnesium binding site 7 out of 10 in 8peu

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Magnesium binding site 7 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 7 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
J:Mg502

b:212.8
occ:1.00
O1B J:AGS501 2.1 197.8 1.0
O2G J:AGS501 2.1 194.9 1.0
OG1 J:THR185 2.1 159.1 1.0
O3B J:AGS501 2.7 195.6 1.0
PB J:AGS501 2.8 200.9 1.0
PG J:AGS501 2.9 198.6 1.0
CB J:THR185 3.5 154.2 1.0
O2B J:AGS501 3.8 191.2 1.0
NZ J:LYS184 4.0 147.4 1.0
O3G J:AGS501 4.0 196.2 1.0
O3A J:AGS501 4.1 196.0 1.0
CG2 J:THR185 4.2 150.2 1.0
OE2 J:GLU215 4.2 135.4 1.0
NH1 J:ARG212 4.3 123.8 1.0
S1G J:AGS501 4.4 201.8 1.0
CE J:LYS184 4.5 144.8 1.0
CA J:THR185 4.5 155.0 1.0
N J:THR185 4.6 151.5 1.0
CG J:LYS184 4.7 140.1 1.0
O1A J:AGS501 4.8 195.1 1.0
OE2 J:GLU211 4.8 145.1 1.0
CD J:GLU215 4.9 134.8 1.0
PA J:AGS501 5.0 197.2 1.0

Magnesium binding site 8 out of 10 in 8peu

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Magnesium binding site 8 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 8 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
K:Mg502

b:217.5
occ:1.00
OG1 K:THR185 2.1 145.5 1.0
O2G K:AGS501 2.1 205.1 1.0
O1B K:AGS501 2.1 205.3 1.0
O1A K:AGS501 2.9 205.4 1.0
PB K:AGS501 3.2 214.2 1.0
PG K:AGS501 3.2 214.0 1.0
CB K:THR185 3.4 138.9 1.0
O3B K:AGS501 3.4 209.2 1.0
PA K:AGS501 3.8 204.2 1.0
O3G K:AGS501 3.8 205.4 1.0
NZ K:LYS184 3.9 152.6 1.0
O3A K:AGS501 3.9 205.7 1.0
NH2 K:ARG212 4.0 132.1 1.0
CG2 K:THR185 4.1 140.6 1.0
O2A K:AGS501 4.1 198.0 1.0
CA K:THR185 4.4 139.7 1.0
O2B K:AGS501 4.5 206.7 1.0
N K:THR185 4.5 135.7 1.0
S1G K:AGS501 4.9 218.7 1.0
NH1 L:ARG366 4.9 140.1 1.0
OE2 K:GLU211 4.9 155.9 1.0
NH1 K:ARG212 4.9 125.7 1.0
CZ K:ARG212 4.9 128.0 1.0
CE K:LYS184 4.9 148.3 1.0

Magnesium binding site 9 out of 10 in 8peu

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Magnesium binding site 9 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 9 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
L:Mg502

b:215.1
occ:1.00
OG1 L:THR185 2.1 150.1 1.0
O1B L:AGS501 2.1 195.1 1.0
O2G L:AGS501 2.1 197.9 1.0
PG L:AGS501 3.2 201.0 1.0
CB L:THR185 3.3 146.6 1.0
PB L:AGS501 3.3 198.4 1.0
O3B L:AGS501 3.5 196.4 1.0
N L:THR185 3.7 143.5 1.0
OE2 L:GLU215 3.8 160.7 1.0
O3G L:AGS501 3.9 195.9 1.0
O1A L:AGS501 3.9 194.3 1.0
CA L:THR185 4.0 147.1 1.0
O2A L:AGS501 4.2 192.8 1.0
O3A L:AGS501 4.3 194.9 1.0
O2B L:AGS501 4.3 193.8 1.0
NH1 L:ARG212 4.3 151.0 1.0
PA L:AGS501 4.3 196.0 1.0
CG2 L:THR185 4.4 148.5 1.0
OE2 L:GLU211 4.6 172.4 1.0
CD L:GLU215 4.7 158.7 1.0
CB L:LYS184 4.8 147.4 1.0
C L:LYS184 4.8 146.0 1.0
S1G L:AGS501 4.9 198.0 1.0
NH2 L:ARG212 4.9 151.1 1.0
N L:LYS184 4.9 146.8 1.0
OD2 L:ASP265 5.0 157.1 1.0
CE L:LYS184 5.0 149.8 1.0

Magnesium binding site 10 out of 10 in 8peu

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Magnesium binding site 10 out of 10 in the Rho-Atpgs-Psu Complex I


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 10 of Rho-Atpgs-Psu Complex I within 5.0Å range:
probe atom residue distance (Å) B Occ
M:Mg502

b:248.5
occ:1.00
OG1 M:THR185 2.1 189.3 1.0
O1B M:AGS501 2.1 241.1 1.0
O2G M:AGS501 2.1 242.5 1.0
PB M:AGS501 3.0 242.4 1.0
O3B M:AGS501 3.1 242.7 1.0
PG M:AGS501 3.1 244.5 1.0
CB M:THR185 3.2 188.7 1.0
NZ M:LYS184 3.4 199.3 1.0
N M:THR185 3.5 189.3 1.0
CG M:LYS184 3.5 198.8 1.0
O2B M:AGS501 3.7 240.4 1.0
CE M:LYS184 3.8 198.3 1.0
CA M:THR185 3.9 188.6 1.0
O3G M:AGS501 4.1 242.9 1.0
CD M:LYS184 4.3 197.6 1.0
O2A M:AGS501 4.3 241.1 1.0
CG2 M:THR185 4.4 188.2 1.0
O3A M:AGS501 4.4 242.3 1.0
C M:LYS184 4.6 197.8 1.0
S1G M:AGS501 4.6 243.9 1.0
N M:LYS184 4.6 198.9 1.0
CB M:LYS184 4.8 198.6 1.0
OD1 M:ASP265 4.8 174.0 1.0
CA M:LYS184 4.9 198.2 1.0
PA M:AGS501 4.9 242.8 1.0
NH2 M:ARG212 5.0 190.3 1.0

Reference:

D.Gjorgjevikj, M.C.Wahl, T.Hilal, B.Loll. Rho-Atpgs-Psu Complex I To Be Published.
Page generated: Fri Oct 4 16:00:44 2024

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