Magnesium in PDB 8pew: Rho-Atpgs-Psu Complex II
Magnesium Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
16;
Binding sites:
The binding sites of Magnesium atom in the Rho-Atpgs-Psu Complex II
(pdb code 8pew). This binding sites where shown within
5.0 Angstroms radius around Magnesium atom.
In total 16 binding sites of Magnesium where determined in the
Rho-Atpgs-Psu Complex II, PDB code: 8pew:
Jump to Magnesium binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Magnesium binding site 1 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 1 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 1 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Mg502
b:198.2
occ:1.00
|
O2G
|
A:AGS501
|
2.1
|
185.6
|
1.0
|
|
OG1
|
A:THR185
|
2.1
|
168.6
|
1.0
|
|
O1B
|
A:AGS501
|
2.2
|
176.3
|
1.0
|
|
O2A
|
A:AGS501
|
2.4
|
179.0
|
1.0
|
|
CG2
|
A:THR185
|
2.6
|
165.8
|
1.0
|
|
CB
|
A:THR185
|
2.9
|
164.7
|
1.0
|
|
NH2
|
B:ARG366
|
2.9
|
368.4
|
1.0
|
|
O1A
|
A:AGS501
|
3.0
|
186.3
|
1.0
|
|
PA
|
A:AGS501
|
3.1
|
183.7
|
1.0
|
|
PB
|
A:AGS501
|
3.3
|
176.3
|
1.0
|
|
PG
|
A:AGS501
|
3.3
|
184.7
|
1.0
|
|
O3A
|
A:AGS501
|
3.7
|
177.0
|
1.0
|
|
O3B
|
A:AGS501
|
3.7
|
177.7
|
1.0
|
|
O3G
|
A:AGS501
|
3.8
|
185.0
|
1.0
|
|
N
|
A:THR185
|
3.8
|
159.7
|
1.0
|
|
CZ
|
B:ARG366
|
3.9
|
368.5
|
1.0
|
|
CA
|
A:THR185
|
4.0
|
159.8
|
1.0
|
|
NH1
|
B:ARG366
|
4.1
|
368.1
|
1.0
|
|
O5'
|
A:AGS501
|
4.6
|
183.8
|
1.0
|
|
O2B
|
A:AGS501
|
4.6
|
167.4
|
1.0
|
|
S1G
|
A:AGS501
|
4.9
|
178.7
|
1.0
|
|
Magnesium binding site 2 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 2 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 2 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Mg502
b:413.9
occ:1.00
|
CG2
|
B:THR185
|
1.9
|
333.9
|
1.0
|
|
OG1
|
B:THR185
|
2.1
|
338.4
|
1.0
|
|
O1B
|
B:AGS501
|
2.1
|
395.3
|
1.0
|
|
O2G
|
B:AGS501
|
2.1
|
405.1
|
1.0
|
|
CB
|
B:THR185
|
2.4
|
332.8
|
1.0
|
|
O2A
|
B:AGS501
|
2.8
|
397.8
|
1.0
|
|
PB
|
B:AGS501
|
2.9
|
399.7
|
1.0
|
|
O3B
|
B:AGS501
|
3.0
|
402.2
|
1.0
|
|
PG
|
B:AGS501
|
3.0
|
407.4
|
1.0
|
|
O1A
|
B:AGS501
|
3.3
|
405.0
|
1.0
|
|
PA
|
B:AGS501
|
3.4
|
403.6
|
1.0
|
|
N
|
B:THR185
|
3.4
|
330.9
|
1.0
|
|
CA
|
B:THR185
|
3.5
|
328.1
|
1.0
|
|
O3A
|
B:AGS501
|
3.5
|
402.3
|
1.0
|
|
O3G
|
B:AGS501
|
3.8
|
405.1
|
1.0
|
|
O2B
|
B:AGS501
|
4.3
|
395.6
|
1.0
|
|
CG
|
B:LYS184
|
4.4
|
329.8
|
1.0
|
|
OE2
|
B:GLU215
|
4.6
|
281.5
|
1.0
|
|
C
|
B:LYS184
|
4.6
|
325.7
|
1.0
|
|
OE2
|
B:GLU211
|
4.7
|
348.0
|
1.0
|
|
C
|
B:THR185
|
4.7
|
325.2
|
1.0
|
|
S1G
|
B:AGS501
|
4.7
|
407.1
|
1.0
|
|
N
|
B:LYS184
|
4.8
|
334.8
|
1.0
|
|
O5'
|
B:AGS501
|
4.9
|
402.4
|
1.0
|
|
N
|
B:MET186
|
4.9
|
321.2
|
1.0
|
|
Magnesium binding site 3 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 3 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 3 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Mg502
b:268.8
occ:1.00
|
OG1
|
C:THR185
|
2.1
|
195.7
|
1.0
|
|
O1B
|
C:AGS501
|
2.1
|
254.4
|
1.0
|
|
O2G
|
C:AGS501
|
2.1
|
259.8
|
1.0
|
|
CB
|
C:THR185
|
2.9
|
194.4
|
1.0
|
|
O2A
|
C:AGS501
|
2.9
|
254.0
|
1.0
|
|
PB
|
C:AGS501
|
3.2
|
257.3
|
1.0
|
|
PG
|
C:AGS501
|
3.2
|
261.9
|
1.0
|
|
O1A
|
C:AGS501
|
3.3
|
258.8
|
1.0
|
|
PA
|
C:AGS501
|
3.4
|
257.0
|
1.0
|
|
O3B
|
C:AGS501
|
3.5
|
258.0
|
1.0
|
|
O3G
|
C:AGS501
|
3.6
|
259.7
|
1.0
|
|
O3A
|
C:AGS501
|
3.7
|
258.2
|
1.0
|
|
CG2
|
C:THR185
|
3.9
|
192.3
|
1.0
|
|
N
|
C:THR185
|
4.0
|
193.6
|
1.0
|
|
CA
|
C:THR185
|
4.0
|
192.4
|
1.0
|
|
O2B
|
C:AGS501
|
4.5
|
254.6
|
1.0
|
|
NZ
|
C:LYS184
|
4.9
|
194.4
|
1.0
|
|
CG
|
C:LYS184
|
4.9
|
190.5
|
1.0
|
|
S1G
|
C:AGS501
|
4.9
|
260.7
|
1.0
|
|
O5'
|
C:AGS501
|
5.0
|
256.7
|
1.0
|
|
Magnesium binding site 4 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 4 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 4 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Mg502
b:295.4
occ:1.00
|
OG1
|
D:THR185
|
2.1
|
186.8
|
1.0
|
|
O2G
|
D:AGS501
|
2.1
|
268.7
|
1.0
|
|
O1B
|
D:AGS501
|
2.1
|
261.2
|
1.0
|
|
O1A
|
D:AGS501
|
2.8
|
269.2
|
1.0
|
|
CB
|
D:THR185
|
2.9
|
182.2
|
1.0
|
|
PB
|
D:AGS501
|
3.0
|
264.6
|
1.0
|
|
PG
|
D:AGS501
|
3.0
|
270.6
|
1.0
|
|
O2A
|
D:AGS501
|
3.0
|
263.6
|
1.0
|
|
O3B
|
D:AGS501
|
3.2
|
266.5
|
1.0
|
|
PA
|
D:AGS501
|
3.2
|
268.6
|
1.0
|
|
O3G
|
D:AGS501
|
3.3
|
268.4
|
1.0
|
|
O3A
|
D:AGS501
|
3.4
|
265.8
|
1.0
|
|
CG2
|
D:THR185
|
3.5
|
179.3
|
1.0
|
|
CA
|
D:THR185
|
4.2
|
179.5
|
1.0
|
|
O2B
|
D:AGS501
|
4.4
|
259.2
|
1.0
|
|
N
|
D:THR185
|
4.4
|
180.4
|
1.0
|
|
O5'
|
D:AGS501
|
4.8
|
266.9
|
1.0
|
|
S1G
|
D:AGS501
|
4.8
|
270.0
|
1.0
|
|
Magnesium binding site 5 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 5 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 5 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Mg502
b:319.1
occ:1.00
|
NH2
|
F:ARG366
|
2.0
|
175.2
|
1.0
|
|
OG1
|
E:THR185
|
2.0
|
257.6
|
1.0
|
|
O1B
|
E:AGS501
|
2.1
|
310.0
|
1.0
|
|
O2G
|
E:AGS501
|
2.1
|
314.4
|
1.0
|
|
O1A
|
E:AGS501
|
3.1
|
314.3
|
1.0
|
|
PB
|
E:AGS501
|
3.1
|
313.3
|
1.0
|
|
CB
|
E:THR185
|
3.2
|
253.0
|
1.0
|
|
CZ
|
F:ARG366
|
3.3
|
177.4
|
1.0
|
|
O2A
|
E:AGS501
|
3.4
|
307.7
|
1.0
|
|
PA
|
E:AGS501
|
3.4
|
312.3
|
1.0
|
|
O3A
|
E:AGS501
|
3.4
|
313.7
|
1.0
|
|
PG
|
E:AGS501
|
3.4
|
317.8
|
1.0
|
|
OE2
|
E:GLU215
|
3.7
|
252.7
|
1.0
|
|
O3B
|
E:AGS501
|
3.8
|
314.1
|
1.0
|
|
CG2
|
E:THR185
|
4.0
|
249.1
|
1.0
|
|
NH1
|
F:ARG366
|
4.1
|
177.0
|
1.0
|
|
NE
|
F:ARG366
|
4.1
|
178.9
|
1.0
|
|
O3G
|
E:AGS501
|
4.2
|
314.6
|
1.0
|
|
CE
|
E:LYS184
|
4.2
|
263.3
|
1.0
|
|
N
|
E:THR185
|
4.3
|
253.1
|
1.0
|
|
CA
|
E:THR185
|
4.3
|
250.6
|
1.0
|
|
O2B
|
E:AGS501
|
4.5
|
309.1
|
1.0
|
|
NH1
|
E:ARG212
|
4.6
|
263.6
|
1.0
|
|
CD
|
E:GLU215
|
4.6
|
251.5
|
1.0
|
|
OE1
|
E:GLU215
|
4.6
|
251.2
|
1.0
|
|
NZ
|
E:LYS184
|
4.7
|
261.3
|
1.0
|
|
CD
|
E:LYS184
|
4.8
|
260.9
|
1.0
|
|
S1G
|
E:AGS501
|
4.9
|
318.4
|
1.0
|
|
CG
|
E:LYS184
|
4.9
|
261.5
|
1.0
|
|
O5'
|
E:AGS501
|
5.0
|
312.9
|
1.0
|
|
Magnesium binding site 6 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 6 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 6 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Mg502
b:240.8
occ:1.00
|
O1B
|
F:AGS501
|
2.1
|
231.2
|
1.0
|
|
OG1
|
F:THR185
|
2.1
|
183.4
|
1.0
|
|
O2G
|
F:AGS501
|
2.1
|
234.4
|
1.0
|
|
PG
|
F:AGS501
|
2.9
|
236.4
|
1.0
|
|
O3G
|
F:AGS501
|
2.9
|
234.8
|
1.0
|
|
O1A
|
F:AGS501
|
3.0
|
234.5
|
1.0
|
|
PB
|
F:AGS501
|
3.1
|
234.5
|
1.0
|
|
CB
|
F:THR185
|
3.3
|
181.0
|
1.0
|
|
O3B
|
F:AGS501
|
3.3
|
233.9
|
1.0
|
|
PA
|
F:AGS501
|
3.6
|
233.8
|
1.0
|
|
O2A
|
F:AGS501
|
3.6
|
230.1
|
1.0
|
|
O3A
|
F:AGS501
|
3.7
|
233.4
|
1.0
|
|
CG2
|
F:THR185
|
4.2
|
179.5
|
1.0
|
|
N
|
F:THR185
|
4.3
|
182.4
|
1.0
|
|
CA
|
F:THR185
|
4.3
|
180.5
|
1.0
|
|
OE2
|
F:GLU215
|
4.4
|
194.8
|
1.0
|
|
O2B
|
F:AGS501
|
4.5
|
230.7
|
1.0
|
|
CG
|
F:LYS184
|
4.5
|
195.9
|
1.0
|
|
S1G
|
F:AGS501
|
4.7
|
234.5
|
1.0
|
|
Magnesium binding site 7 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 7 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 7 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Mg502
b:276.2
occ:1.00
|
OG1
|
G:THR185
|
2.1
|
204.5
|
1.0
|
|
O1B
|
G:AGS501
|
2.1
|
257.5
|
1.0
|
|
O2G
|
G:AGS501
|
2.1
|
264.1
|
1.0
|
|
O3G
|
G:AGS501
|
2.5
|
266.9
|
1.0
|
|
PG
|
G:AGS501
|
2.7
|
266.8
|
1.0
|
|
PB
|
G:AGS501
|
3.2
|
261.6
|
1.0
|
|
CB
|
G:THR185
|
3.3
|
199.2
|
1.0
|
|
O3B
|
G:AGS501
|
3.3
|
262.9
|
1.0
|
|
O2A
|
G:AGS501
|
3.6
|
257.5
|
1.0
|
|
CG
|
G:LYS184
|
3.7
|
199.2
|
1.0
|
|
N
|
G:THR185
|
3.8
|
199.6
|
1.0
|
|
CA
|
G:THR185
|
4.0
|
197.4
|
1.0
|
|
O3A
|
G:AGS501
|
4.2
|
264.1
|
1.0
|
|
PA
|
G:AGS501
|
4.3
|
264.1
|
1.0
|
|
O2B
|
G:AGS501
|
4.3
|
256.5
|
1.0
|
|
O1A
|
G:AGS501
|
4.4
|
265.3
|
1.0
|
|
CD
|
G:LYS184
|
4.4
|
197.5
|
1.0
|
|
CG2
|
G:THR185
|
4.4
|
197.4
|
1.0
|
|
S1G
|
G:AGS501
|
4.5
|
265.8
|
1.0
|
|
NZ
|
G:LYS184
|
4.6
|
203.2
|
1.0
|
|
C
|
G:LYS184
|
4.8
|
195.4
|
1.0
|
|
N
|
G:LYS184
|
4.8
|
208.5
|
1.0
|
|
NH1
|
H:ARG366
|
4.8
|
170.1
|
1.0
|
|
CB
|
G:LYS184
|
4.9
|
196.0
|
1.0
|
|
Magnesium binding site 8 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 8 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 8 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Mg502
b:289.9
occ:1.00
|
OG1
|
H:THR185
|
2.1
|
213.3
|
1.0
|
|
O2G
|
H:AGS501
|
2.1
|
308.2
|
1.0
|
|
O1B
|
H:AGS501
|
2.1
|
289.2
|
1.0
|
|
O3G
|
H:AGS501
|
2.3
|
314.9
|
1.0
|
|
PG
|
H:AGS501
|
2.6
|
315.8
|
1.0
|
|
CB
|
H:THR185
|
2.7
|
206.0
|
1.0
|
|
PB
|
H:AGS501
|
3.2
|
298.4
|
1.0
|
|
O3B
|
H:AGS501
|
3.3
|
309.8
|
1.0
|
|
O2A
|
H:AGS501
|
3.5
|
280.6
|
1.0
|
|
CG2
|
H:THR185
|
3.6
|
192.1
|
1.0
|
|
CA
|
H:THR185
|
3.9
|
196.3
|
1.0
|
|
O1A
|
H:AGS501
|
3.9
|
316.4
|
1.0
|
|
N
|
H:THR185
|
3.9
|
209.3
|
1.0
|
|
PA
|
H:AGS501
|
4.0
|
303.4
|
1.0
|
|
O3A
|
H:AGS501
|
4.1
|
304.1
|
1.0
|
|
S1G
|
H:AGS501
|
4.4
|
316.2
|
1.0
|
|
O2B
|
H:AGS501
|
4.4
|
286.3
|
1.0
|
|
NH1
|
X:ARG366
|
4.8
|
72.4
|
1.0
|
|
CG
|
H:LYS184
|
4.9
|
241.3
|
1.0
|
|
C
|
H:THR185
|
4.9
|
181.3
|
1.0
|
|
Magnesium binding site 9 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 9 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 9 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
I:Mg502
b:264.7
occ:1.00
|
OG1
|
I:THR185
|
2.1
|
207.3
|
1.0
|
|
O2G
|
I:AGS501
|
2.1
|
259.5
|
1.0
|
|
O1B
|
I:AGS501
|
2.1
|
249.4
|
1.0
|
|
PB
|
I:AGS501
|
3.2
|
251.7
|
1.0
|
|
PG
|
I:AGS501
|
3.2
|
262.3
|
1.0
|
|
O3B
|
I:AGS501
|
3.3
|
256.7
|
1.0
|
|
CB
|
I:THR185
|
3.3
|
201.7
|
1.0
|
|
O2A
|
I:AGS501
|
3.6
|
252.5
|
1.0
|
|
N
|
I:THR185
|
3.8
|
198.4
|
1.0
|
|
O1A
|
I:AGS501
|
4.0
|
267.9
|
1.0
|
|
CA
|
I:THR185
|
4.1
|
195.8
|
1.0
|
|
PA
|
I:AGS501
|
4.1
|
264.2
|
1.0
|
|
O3A
|
I:AGS501
|
4.2
|
258.8
|
1.0
|
|
O3G
|
I:AGS501
|
4.3
|
263.2
|
1.0
|
|
O2B
|
I:AGS501
|
4.3
|
240.1
|
1.0
|
|
CE
|
I:LYS184
|
4.4
|
198.2
|
1.0
|
|
CG2
|
I:THR185
|
4.4
|
194.4
|
1.0
|
|
S1G
|
I:AGS501
|
4.6
|
259.5
|
1.0
|
|
NZ
|
I:LYS184
|
4.7
|
205.6
|
1.0
|
|
CB
|
I:LYS184
|
4.7
|
194.8
|
1.0
|
|
C
|
I:LYS184
|
4.8
|
193.6
|
1.0
|
|
NH1
|
I:ARG212
|
4.8
|
148.3
|
1.0
|
|
OE2
|
I:GLU215
|
4.9
|
154.1
|
1.0
|
|
NH1
|
J:ARG366
|
4.9
|
165.9
|
1.0
|
|
N
|
I:LYS184
|
4.9
|
204.9
|
1.0
|
|
Magnesium binding site 10 out
of 16 in 8pew
Go back to
Magnesium Binding Sites List in 8pew
Magnesium binding site 10 out
of 16 in the Rho-Atpgs-Psu Complex II
 Mono view
 Stereo pair view
|
|
A full contact list of Magnesium with other atoms in the Mg binding
site number 10 of Rho-Atpgs-Psu Complex II within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
J:Mg502
b:221.5
occ:1.00
|
O1B
|
J:AGS501
|
2.1
|
214.4
|
1.0
|
|
OG1
|
J:THR185
|
2.1
|
154.9
|
1.0
|
|
O2G
|
J:AGS501
|
2.1
|
218.3
|
1.0
|
|
PB
|
J:AGS501
|
3.3
|
219.2
|
1.0
|
|
PG
|
J:AGS501
|
3.3
|
221.8
|
1.0
|
|
CB
|
J:THR185
|
3.4
|
152.2
|
1.0
|
|
O3B
|
J:AGS501
|
3.6
|
216.8
|
1.0
|
|
O2A
|
J:AGS501
|
3.8
|
212.0
|
1.0
|
|
O1A
|
J:AGS501
|
4.1
|
216.5
|
1.0
|
|
S1G
|
J:AGS501
|
4.2
|
219.4
|
1.0
|
|
O3A
|
J:AGS501
|
4.2
|
216.6
|
1.0
|
|
PA
|
J:AGS501
|
4.2
|
215.6
|
1.0
|
|
OE1
|
J:GLU215
|
4.2
|
154.7
|
1.0
|
|
N
|
J:THR185
|
4.3
|
150.2
|
1.0
|
|
CG2
|
J:THR185
|
4.3
|
151.7
|
1.0
|
|
CA
|
J:THR185
|
4.4
|
149.6
|
1.0
|
|
O2B
|
J:AGS501
|
4.5
|
211.4
|
1.0
|
|
CD
|
J:GLU215
|
4.6
|
152.9
|
1.0
|
|
O3G
|
J:AGS501
|
4.6
|
217.6
|
1.0
|
|
CG
|
J:LYS184
|
4.7
|
138.4
|
1.0
|
|
OE2
|
J:GLU215
|
4.7
|
152.5
|
1.0
|
|
NH1
|
J:ARG212
|
4.8
|
159.4
|
1.0
|
|
CE
|
J:LYS184
|
4.9
|
141.8
|
1.0
|
|
Reference:
D.Gjorgjevikj,
M.C.Wahl,
T.Hilal,
B.Loll.
Rho-Atpgs-Psu Complex II To Be Published.
Page generated: Fri Oct 4 16:01:00 2024
|
