Magnesium in PDB 8pk5: INTS13-INTS14 Complex with ZNF609

The structure of INTS13-INTS14 Complex with ZNF609, PDB code: 8pk5 was solved by K.Sabath, S.Jonas, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.94 / 2.50
Space group	P 21 21 2
Cell size a, b, c (Å), α, β, γ (°)	189.065, 115.629, 147.7, 90, 90, 90
R / Rfree (%)	19 / 21.4

The binding sites of Magnesium atom in the INTS13-INTS14 Complex with ZNF609 (pdb code 8pk5). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the INTS13-INTS14 Complex with ZNF609, PDB code: 8pk5:

Magnesium binding site 1 out of 1 in the INTS13-INTS14 Complex with ZNF609


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of INTS13-INTS14 Complex with ZNF609 within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg600 b:176.5 occ:1.00 OG B:SER12 2.4 86.8 1.0 OG B:SER10 2.4 78.0 1.0 CB B:SER10 3.5 71.3 1.0 CB B:SER12 3.7 64.8 1.0 CB B:CYS118 3.7 128.7 1.0 O B:CYS118 4.0 150.7 1.0 OD2 B:ASP8 4.0 74.8 1.0 OD1 B:ASP116 4.1 65.3 1.0 OD1 B:ASP8 4.4 68.7 1.0 CA B:CYS118 4.6 130.2 1.0 N B:SER12 4.7 58.0 1.0 CG B:ASP8 4.7 72.1 1.0 OD2 B:ASP116 4.7 57.3 1.0 C B:CYS118 4.8 143.4 1.0 CA B:SER12 4.8 59.3 1.0 CA B:SER10 4.8 58.7 1.0 CG B:ASP116 4.8 62.3 1.0 N B:CYS118 4.8 119.2 1.0 SG B:CYS118 4.9 133.0 1.0

K.Sabath, A.Nabih, C.Arnold, R.Moussa, D.Domjan, J.B.Zaugg, S.Jonas. Basis of Gene-Specific Transcription Regulation By the Integrator Complex. Mol.Cell 2024.
ISSN: ISSN 1097-2765
PubMed: 38906142
DOI: 10.1016/J.MOLCEL.2024.05.027