Magnesium in PDB 8pvx: Structure of the LIFEACT13-F-Actin Complex

The binding sites of Magnesium atom in the Structure of the LIFEACT13-F-Actin Complex (pdb code 8pvx). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 5 binding sites of Magnesium where determined in the Structure of the LIFEACT13-F-Actin Complex, PDB code: 8pvx:
Jump to Magnesium binding site number: 1; 2; 3; 4; 5;

Magnesium binding site 1 out of 5 in the Structure of the LIFEACT13-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Structure of the LIFEACT13-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg402 b:114.5 occ:1.00 O1B C:ADP401 2.0 120.0 1.0 O1A C:ADP401 2.4 120.0 1.0 PB C:ADP401 2.9 120.0 1.0 O3A C:ADP401 2.9 120.0 1.0 PA C:ADP401 3.2 120.0 1.0 O3B C:ADP401 3.3 120.0 1.0 CA C:GLY156 3.4 120.6 1.0 O2A C:ADP401 4.0 120.0 1.0 N C:GLY156 4.2 120.6 1.0 O2B C:ADP401 4.3 120.0 1.0 NZ C:LYS18 4.3 107.5 1.0 OD1 C:ASP154 4.4 118.4 1.0 O5' C:ADP401 4.5 120.0 1.0 C C:GLY156 4.7 120.6 1.0 N C:ASP157 4.8 124.1 1.0 OD2 C:ASP154 4.8 118.4 1.0 NE2 C:GLN137 4.9 117.6 1.0 CA C:GLY13 4.9 119.8 1.0 OD2 C:ASP11 4.9 117.1 1.0

Magnesium binding site 2 out of 5 in the Structure of the LIFEACT13-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Structure of the LIFEACT13-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ E:Mg402 b:112.6 occ:1.00 O1B E:ADP401 2.1 128.1 1.0 O1A E:ADP401 2.9 128.1 1.0 PB E:ADP401 3.1 128.1 1.0 O3A E:ADP401 3.4 128.1 1.0 O3B E:ADP401 3.5 128.1 1.0 PA E:ADP401 3.6 128.1 1.0 CA E:GLY156 3.8 124.2 1.0 NZ E:LYS18 4.1 123.7 1.0 O2A E:ADP401 4.3 128.1 1.0 OD1 E:ASP154 4.3 122.5 1.0 N E:GLY156 4.4 124.2 1.0 NE2 E:GLN137 4.4 122.7 1.0 O2B E:ADP401 4.5 128.1 1.0 OD2 E:ASP154 4.6 122.5 1.0 OD2 E:ASP11 4.6 132.4 1.0 CA E:GLY13 4.7 131.7 1.0 CG E:ASP154 4.9 122.5 1.0

Magnesium binding site 3 out of 5 in the Structure of the LIFEACT13-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 3 of Structure of the LIFEACT13-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg402 b:128.6 occ:1.00 O1B A:ADP401 2.0 129.7 1.0 O1A A:ADP401 2.1 129.7 1.0 O3A A:ADP401 2.3 129.7 1.0 PB A:ADP401 2.5 129.7 1.0 PA A:ADP401 2.6 129.7 1.0 CA A:GLY156 2.9 125.8 1.0 O3B A:ADP401 3.0 129.7 1.0 O2A A:ADP401 3.6 129.7 1.0 N A:GLY156 3.9 125.8 1.0 O2B A:ADP401 3.9 129.7 1.0 O5' A:ADP401 3.9 129.7 1.0 C A:GLY156 4.1 125.8 1.0 N A:ASP157 4.1 131.9 1.0 NZ A:LYS18 4.3 122.9 1.0 OD1 A:ASP154 4.6 127.5 1.0 C A:SER155 4.7 126.9 1.0 C5' A:ADP401 4.9 129.7 1.0 O A:SER155 4.9 126.9 1.0

Magnesium binding site 4 out of 5 in the Structure of the LIFEACT13-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 4 of Structure of the LIFEACT13-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ D:Mg402 b:132.1 occ:1.00 O1B D:ADP401 2.0 125.2 1.0 O1A D:ADP401 2.0 125.2 1.0 O3A D:ADP401 2.1 125.2 1.0 PB D:ADP401 2.4 125.2 1.0 PA D:ADP401 2.5 125.2 1.0 CA D:GLY156 2.8 123.1 1.0 O3B D:ADP401 2.9 125.2 1.0 O2A D:ADP401 3.5 125.2 1.0 N D:GLY156 3.8 123.1 1.0 O5' D:ADP401 3.8 125.2 1.0 O2B D:ADP401 3.8 125.2 1.0 C D:GLY156 3.8 123.1 1.0 N D:ASP157 3.9 124.6 1.0 NZ D:LYS18 4.4 109.8 1.0 C D:SER155 4.7 121.0 1.0 C5' D:ADP401 4.7 125.2 1.0 OD1 D:ASP154 4.7 122.0 1.0 O D:SER155 4.9 121.0 1.0 O D:GLY156 5.0 123.1 1.0

Magnesium binding site 5 out of 5 in the Structure of the LIFEACT13-F-Actin Complex


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 5 of Structure of the LIFEACT13-F-Actin Complex within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg402 b:97.8 occ:1.00 O1B B:ADP401 2.1 119.2 1.0 PB B:ADP401 3.1 119.2 1.0 O1A B:ADP401 3.2 119.2 1.0 O3B B:ADP401 3.4 119.2 1.0 O3A B:ADP401 3.6 119.2 1.0 NE2 B:GLN137 3.7 119.7 1.0 PA B:ADP401 3.9 119.2 1.0 CA B:GLY156 4.0 120.7 1.0 NZ B:LYS18 4.2 110.4 1.0 CD B:GLN137 4.4 119.7 1.0 O2B B:ADP401 4.5 119.2 1.0 OD2 B:ASP11 4.5 117.0 1.0 O2A B:ADP401 4.6 119.2 1.0 OD1 B:ASP154 4.6 121.6 1.0 OE1 B:GLN137 4.6 119.7 1.0 OD2 B:ASP154 4.6 121.6 1.0 N B:GLY156 4.7 120.7 1.0 CA B:GLY13 4.8 116.5 1.0

A.Belyy, S.Raunser. To Be Published To Be Published.