Magnesium in PDB 8pzu: Wait Complex: Bam Bound Darobactin-B and Compact Sura

All present enzymatic activity of Wait Complex: Bam Bound Darobactin-B and Compact Sura:
5.2.1.8;

The binding sites of Magnesium atom in the Wait Complex: Bam Bound Darobactin-B and Compact Sura (pdb code 8pzu). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Wait Complex: Bam Bound Darobactin-B and Compact Sura, PDB code: 8pzu:

Magnesium binding site 1 out of 1 in the Wait Complex: Bam Bound Darobactin-B and Compact Sura


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Wait Complex: Bam Bound Darobactin-B and Compact Sura within 5.0Å range: probe atom residue distance (Å) B Occ B:Mg401 b:23.6 occ:1.00 OD1 B:ASP212 2.0 28.2 1.0 OD1 B:ASP248 2.1 26.2 1.0 O B:GLY196 2.1 23.3 1.0 CG B:ASP212 2.8 28.2 1.0 OD2 B:ASP212 2.8 28.2 1.0 CG B:ASP248 2.9 26.2 1.0 O B:LEU194 2.9 26.3 1.0 OD2 B:ASP248 3.1 26.2 1.0 C B:GLY196 3.3 23.3 1.0 OE2 B:GLU197 3.4 22.6 1.0 OD2 B:ASP246 3.6 30.9 1.0 CD B:GLU197 3.8 22.6 1.0 CA B:GLU197 4.0 22.6 1.0 C B:LEU194 4.0 26.3 1.0 N B:GLU197 4.1 22.6 1.0 OE1 B:GLU197 4.1 22.6 1.0 CB B:ASP212 4.2 28.2 1.0 CG B:ASP246 4.2 30.9 1.0 CB B:ASP248 4.3 26.2 1.0 CB B:ASP246 4.3 30.9 1.0 CA B:GLY196 4.4 23.3 1.0 N B:GLY196 4.4 23.3 1.0 N B:LEU194 4.5 26.3 1.0 C B:ARG195 4.6 22.5 1.0 CG B:GLU197 4.6 22.6 1.0 CA B:LEU194 4.7 26.3 1.0 O B:ARG195 4.8 22.5 1.0 CB B:GLU197 4.8 22.6 1.0 CB B:LEU194 4.8 26.3 1.0 CA B:ASP212 4.8 28.2 1.0 CA B:ASP248 4.9 26.2 1.0 CB B:SER193 4.9 27.2 1.0 OG B:SER193 5.0 27.2 1.0

K.L.Fenn, J.E.Horne, J.A.Crossley, N.Bohringer, R.J.Horne, T.F.Schaberle, A.N.Calabrese, S.E.Radford, N.A.Ranson. Outer Membrane Protein Assembly Mediated By Bam-Sura Complexes. Nat Commun V. 15 7612 2024.
ISSN: ESSN 2041-1723
PubMed: 39218969
DOI: 10.1038/S41467-024-51358-X