Magnesium in PDB 8q3b: The Closed State of the Asfv Apo-Rna Polymerase

All present enzymatic activity of The Closed State of the Asfv Apo-Rna Polymerase:
2.7.7.6;

The structure of The Closed State of the Asfv Apo-Rna Polymerase also contains other interesting chemical elements:

Zinc

(Zn)

6 atoms

The binding sites of Magnesium atom in the The Closed State of the Asfv Apo-Rna Polymerase (pdb code 8q3b). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the The Closed State of the Asfv Apo-Rna Polymerase, PDB code: 8q3b:

Magnesium binding site 1 out of 1 in the The Closed State of the Asfv Apo-Rna Polymerase


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of The Closed State of the Asfv Apo-Rna Polymerase within 5.0Å range: probe atom residue distance (Å) B Occ A:Mg1503 b:90.8 occ:1.00 OD1 A:ASP457 2.0 70.8 1.0 OD1 A:ASP459 2.1 71.7 1.0 OD2 A:ASP459 2.1 80.7 1.0 OD1 A:ASP461 2.1 69.3 1.0 OD2 A:ASP457 2.1 72.7 1.0 OD2 A:ASP461 2.1 67.7 1.0 CG A:ASP457 2.2 67.2 1.0 CG A:ASP459 2.3 71.8 1.0 CG A:ASP461 2.4 67.3 1.0 O A:ASP457 3.4 57.8 1.0 CB A:ASP457 3.4 54.1 1.0 CB A:ASP459 3.8 60.4 1.0 CB A:ASP461 3.8 55.6 1.0 C A:ASP457 3.8 52.2 1.0 N A:ASP457 3.9 63.3 1.0 CA A:ASP457 3.9 50.8 1.0 N A:ASP459 4.1 64.2 1.0 CA A:ASP459 4.4 61.6 1.0 N A:ASP461 4.4 61.7 1.0 CA A:ASP461 4.6 57.4 1.0 C A:ASP459 4.6 68.0 1.0 N A:PHE458 4.8 49.7 1.0 O A:ASP459 4.9 71.9 1.0 C A:ALA456 5.0 52.9 1.0

S.Pilotto, M.Sykora, G.Cackett, C.Dulson, F.Werner. Structural Characterization of the Fully Recombinant Rna Polymerase From African Swine Fever Virus To Be Published.