Magnesium in PDB 8q4s: Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium.

Enzymatic activity of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium.

All present enzymatic activity of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium.:
3.1.3.3;

Protein crystallography data

The structure of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium., PDB code: 8q4s was solved by T.Scaillet, J.Wouters, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.56 / 2.08
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 144.08, 144.08, 144.08, 90, 90, 90
R / Rfree (%) 18.5 / 22.5

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium. (pdb code 8q4s). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium., PDB code: 8q4s:

Magnesium binding site 1 out of 1 in 8q4s

Go back to Magnesium Binding Sites List in 8q4s
Magnesium binding site 1 out of 1 in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium. within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg304

b:26.5
occ:1.00
 OD2 A:ASP86 1.9 51.3 1.0
OD1 A:ASP243 2.2 37.6 1.0
O A:HOH419 2.3 35.4 1.0
O A:ASP88 2.3 34.4 1.0
O1 A:E7P301 2.4 43.9 0.8
O A:HOH416 2.4 38.9 1.0
CG A:ASP86 3.0 45.6 1.0
CG A:ASP243 3.2 38.0 1.0
C A:ASP88 3.4 34.3 1.0
OD2 A:ASP243 3.5 36.7 1.0
OD1 A:ASP86 3.6 47.8 1.0
P A:E7P301 3.8 59.2 0.8
CB A:ASP88 4.0 37.7 1.0
OG1 A:THR90 4.0 36.9 1.0
CA A:ASP88 4.1 34.9 1.0
OD2 A:ASP247 4.1 34.3 1.0
N A:E7P301 4.1 32.2 0.8
CE A:MET118 4.1 38.0 0.0
N A:ASP88 4.1 35.1 1.0
CB A:ASP86 4.3 37.4 1.0
O2 A:E7P301 4.4 34.4 0.8
SD A:MET118 4.4 38.9 1.0
O3 A:E7P301 4.4 46.0 0.8
OE2 A:GLU95 4.5 41.8 1.0
CB A:SER89 4.5 34.2 1.0
N A:SER89 4.5 35.4 1.0
N A:GLY244 4.6 30.4 1.0
CB A:ASP243 4.6 31.4 1.0
N A:ASP243 4.7 31.0 1.0
C A:MET87 4.8 37.4 1.0
CA A:SER89 4.9 37.2 1.0
N A:THR90 5.0 33.7 1.0
CA A:GLY244 5.0 31.1 1.0

Reference:

T.Scaillet, J.Wouters. Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP4 and Magnesium. To Be Published.
Page generated: Fri Oct 4 16:33:43 2024

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