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Magnesium in PDB 8qfl: Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron

Protein crystallography data

The structure of Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron, PDB code: 8qfl was solved by C.M.Vasseur, F.P.Seebeck, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.37 / 1.75
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 44.611, 58.946, 134.776, 90, 90, 90
R / Rfree (%) 17.3 / 21.2

Other elements in 8qfl:

The structure of Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron also contains other interesting chemical elements:

Iron (Fe) 2 atoms

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron (pdb code 8qfl). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron, PDB code: 8qfl:

Magnesium binding site 1 out of 1 in 8qfl

Go back to Magnesium Binding Sites List in 8qfl
Magnesium binding site 1 out of 1 in the Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Ergothioneine Dioxygenase From Thermocatellispora Tengchongensis in Complex with Iron within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg203

b:28.6
occ:1.00
OE2 A:GLU41 2.1 28.9 1.0
O A:HOH313 2.2 34.6 1.0
CD A:GLU41 3.1 30.7 1.0
OE1 A:GLU41 3.4 32.2 1.0
HE1 A:HIS45 3.6 37.3 1.0
HE2 A:HIS45 3.9 49.0 1.0
CE1 A:HIS45 4.2 31.1 1.0
NE2 A:HIS45 4.3 40.8 1.0
CG A:GLU41 4.5 29.2 1.0
HG2 A:GLU41 4.6 35.0 1.0
HG3 A:GLU41 4.7 35.0 1.0

Reference:

E.Nalivaiko, C.M.Vasseur, F.P.Seebeck. Enzyme-Catalyzed Oxidative Degradation of Ergothioneine. Angew.Chem.Int.Ed.Engl. 18445 2023.
ISSN: ESSN 1521-3773
PubMed: 38095354
DOI: 10.1002/ANIE.202318445
Page generated: Fri Oct 4 16:43:06 2024

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