Magnesium in PDB 8qfs: Cryo-Em Structure of Sidh From Legionella Pneumophila

The binding sites of Magnesium atom in the Cryo-Em Structure of Sidh From Legionella Pneumophila (pdb code 8qfs). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Sidh From Legionella Pneumophila, PDB code: 8qfs:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Sidh From Legionella Pneumophila


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Sidh From Legionella Pneumophila within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg401 b:27.2 occ:1.00 O2B C:GTP402 2.0 31.3 1.0 OG1 C:THR26 2.0 27.5 1.0 OG1 C:THR62 2.1 40.2 1.0 O1G C:GTP402 2.1 39.8 1.0 CB C:THR62 2.9 34.0 1.0 PB C:GTP402 3.3 25.6 1.0 PG C:GTP402 3.4 27.2 1.0 OD2 C:ASP81 3.4 44.5 1.0 CB C:THR26 3.5 27.8 1.0 CG2 C:THR62 3.6 30.3 1.0 O3B C:GTP402 3.7 36.2 1.0 N C:THR26 3.8 20.1 1.0 OD1 C:ASP81 3.9 40.6 1.0 O C:CYS82 3.9 37.3 1.0 CG C:ASP81 4.0 38.9 1.0 O1B C:GTP402 4.1 28.0 1.0 CA C:THR26 4.1 20.0 1.0 CA C:THR62 4.2 28.6 1.0 O2A C:GTP402 4.2 42.9 1.0 O3G C:GTP402 4.3 33.3 1.0 CG2 C:THR26 4.3 27.9 1.0 N C:THR62 4.3 37.6 1.0 O2G C:GTP402 4.4 36.0 1.0 CE C:LYS25 4.4 14.8 1.0 O3A C:GTP402 4.4 25.3 1.0 OD2 C:ASP51 4.5 73.2 1.0 OD1 C:ASP51 4.5 70.3 1.0 CB C:LYS25 4.6 18.4 1.0 C C:LYS25 4.8 23.4 1.0 C C:CYS82 4.8 32.1 1.0 PA C:GTP402 4.9 14.7 1.0 CG C:ASP51 4.9 72.2 1.0 NZ C:LYS25 5.0 26.2 1.0

R.Sharma, M.Adams, S.Griffith-Jones, T.Sahr, L.G.Valero, F.Weis, M.Hons, S.Gharbi, R.Berkane, A.Stolz, C.Buchrieser, S.Bhogaraju. Structural Basis For the Toxicity of Legionella Pneumophila Effector Sidh To Be Published.