Magnesium in PDB 8qhc: Cryo-Em Structure of Sidh From Legionella Pneumophila in Complex with Lubx

The binding sites of Magnesium atom in the Cryo-Em Structure of Sidh From Legionella Pneumophila in Complex with Lubx (pdb code 8qhc). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Cryo-Em Structure of Sidh From Legionella Pneumophila in Complex with Lubx, PDB code: 8qhc:

Magnesium binding site 1 out of 1 in the Cryo-Em Structure of Sidh From Legionella Pneumophila in Complex with Lubx


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryo-Em Structure of Sidh From Legionella Pneumophila in Complex with Lubx within 5.0Å range: probe atom residue distance (Å) B Occ C:Mg401 b:27.2 occ:1.00 O2B C:GTP402 1.9 37.2 1.0 OG1 C:THR62 2.0 44.4 1.0 OG1 C:THR26 2.1 45.7 1.0 O1G C:GTP402 2.4 39.8 1.0 CB C:THR62 3.0 38.6 1.0 O3G C:GTP402 3.0 44.5 1.0 PG C:GTP402 3.1 43.9 1.0 PB C:GTP402 3.2 37.3 1.0 CB C:THR26 3.6 41.4 1.0 O3B C:GTP402 3.6 40.6 1.0 OD2 C:ASP81 3.7 40.9 1.0 OD1 C:ASP81 3.9 35.3 1.0 CG2 C:THR62 3.9 35.1 1.0 O2A C:GTP402 4.0 45.5 1.0 N C:THR26 4.0 31.2 1.0 O1B C:GTP402 4.0 37.2 1.0 N C:THR62 4.0 37.4 1.0 CA C:THR62 4.1 34.4 1.0 O C:CYS82 4.1 45.6 1.0 CG C:ASP81 4.2 40.3 1.0 OD2 C:ASP51 4.3 83.5 1.0 CA C:THR26 4.3 30.9 1.0 CG2 C:THR26 4.3 39.6 1.0 O3A C:GTP402 4.4 35.4 1.0 OD1 C:ASP51 4.5 83.3 1.0 O2G C:GTP402 4.5 42.5 1.0 CE C:LYS25 4.7 24.1 1.0 CG C:ASP51 4.7 84.4 1.0 PA C:GTP402 4.8 25.7 1.0 CB C:LYS25 4.9 27.2 1.0

R.Sharma, M.Adams, S.Griffith-Jones, T.Sahr, L.G.Valero, F.Weis, M.Hons, S.Gharbi, R.Berkane, A.Stolz, C.Buchrieser, S.Bhogaraju. Structural Basis For the Toxicity of Legionella Pneumophila Effector Sidh To Be Published.