Magnesium in PDB 8qob: Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium

Enzymatic activity of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium

All present enzymatic activity of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium:
3.1.3.3;

Protein crystallography data

The structure of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium, PDB code: 8qob was solved by T.Scaillet, J.Wouters, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.94 / 2.74
Space group I 21 3
Cell size a, b, c (Å), α, β, γ (°) 145.267, 145.267, 145.267, 90, 90, 90
R / Rfree (%) 18 / 24.3

Other elements in 8qob:

The structure of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium (pdb code 8qob). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total only one binding site of Magnesium was determined in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium, PDB code: 8qob:

Magnesium binding site 1 out of 1 in 8qob

Go back to Magnesium Binding Sites List in 8qob
Magnesium binding site 1 out of 1 in the Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Mg302

b:36.7
occ:1.00
 OD2 A:ASP86 2.1 62.0 1.0
OD1 A:ASP243 2.1 53.1 1.0
O A:HOH408 2.1 67.5 1.0
O A:ASP88 2.2 51.5 1.0
O08 A:WHT301 2.3 68.2 1.0
O A:HOH402 2.4 54.7 1.0
CG A:ASP243 3.1 53.6 1.0
CG A:ASP86 3.2 64.2 1.0
C A:ASP88 3.3 49.6 1.0
OD2 A:ASP243 3.5 51.8 1.0
OD1 A:ASP86 3.6 69.6 1.0
N06 A:WHT301 3.7 63.1 1.0
P07 A:WHT301 3.8 79.2 1.0
CB A:ASP88 4.0 57.0 1.0
CA A:ASP88 4.1 57.7 1.0
CB A:SER89 4.2 47.7 1.0
OD2 A:ASP247 4.2 50.3 1.0
OG1 A:THR90 4.3 53.1 1.0
N A:ASP88 4.3 59.3 1.0
N A:SER89 4.4 58.6 1.0
CB A:ASP86 4.4 47.1 1.0
O10 A:WHT301 4.4 51.3 1.0
SD A:MET118 4.4 57.2 1.0
O09 A:WHT301 4.4 66.0 1.0
CB A:ASP243 4.5 45.8 1.0
OE2 A:GLU95 4.6 56.2 1.0
N A:THR90 4.6 62.5 1.0
N A:GLY244 4.7 53.4 1.0
CA A:SER89 4.7 55.7 1.0
N A:ASP243 4.7 48.2 1.0
C02 A:WHT301 4.8 75.0 1.0
OE1 A:GLU95 4.9 62.3 1.0
C A:SER89 4.9 47.6 1.0
C A:MET87 4.9 57.5 1.0
C01 A:WHT301 4.9 67.9 1.0

Reference:

T.Scaillet, J.Wouters. Crystal Structure of Phosphoserine Phosphatase (Serb) From Brucella Melitensis in Complex with AP3 and Magnesium To Be Published.
Page generated: Thu Oct 31 21:59:10 2024

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