Magnesium in PDB 8rck: Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy.

Enzymatic activity of Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy.

All present enzymatic activity of Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy.:
2.7.11.1;

Magnesium Binding Sites:

The binding sites of Magnesium atom in the Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy. (pdb code 8rck). This binding sites where shown within 5.0 Angstroms radius around Magnesium atom.
In total 2 binding sites of Magnesium where determined in the Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy., PDB code: 8rck:
Jump to Magnesium binding site number: 1; 2;

Magnesium binding site 1 out of 2 in 8rck

Go back to Magnesium Binding Sites List in 8rck
Magnesium binding site 1 out of 2 in the Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 1 of Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg3001

b:35.0
occ:1.00
O2B B:ANP3000 2.0 59.1 1.0
OE1 B:GLN2167 2.1 94.9 1.0
O1A B:ANP3000 2.5 58.7 1.0
O1G B:ANP3000 2.5 61.4 1.0
CD B:GLN2167 3.2 94.8 1.0
PB B:ANP3000 3.4 66.7 1.0
HB2 B:GLN2167 3.5 93.6 1.0
HG3 B:GLN2167 3.5 94.9 1.0
PA B:ANP3000 3.7 70.3 1.0
CG B:GLN2167 3.8 94.7 1.0
PG B:ANP3000 3.8 76.5 1.0
O3A B:ANP3000 4.0 61.8 1.0
N3B B:ANP3000 4.1 58.7 1.0
CB B:GLN2167 4.2 89.3 1.0
NE2 B:GLN2167 4.2 93.3 1.0
HE21 B:GLN2167 4.3 93.5 1.0
O1B B:ANP3000 4.4 55.7 1.0
O5' B:ANP3000 4.6 58.7 1.0
HE3 B:LYS2187 4.6 49.6 1.0
O3G B:ANP3000 4.6 57.4 1.0
HB3 B:GLN2167 4.7 93.1 1.0
HG2 B:GLN2167 4.7 94.2 1.0
HB2 B:LYS2166 4.8 148.2 1.0
O2G B:ANP3000 4.8 62.4 1.0
O2A B:ANP3000 4.9 58.3 1.0
H B:GLN2167 4.9 96.1 1.0
HE22 B:GLN2167 5.0 93.4 1.0

Magnesium binding site 2 out of 2 in 8rck

Go back to Magnesium Binding Sites List in 8rck
Magnesium binding site 2 out of 2 in the Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy.


Mono view


Stereo pair view

A full contact list of Magnesium with other atoms in the Mg binding site number 2 of Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy. within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Mg3002

b:25.4
occ:1.00
OE2 B:GLU2190 2.0 47.6 1.0
HG2 B:LYS2187 2.5 46.5 1.0
O2A B:ANP3000 2.6 58.3 1.0
CD B:GLU2190 2.8 46.2 1.0
OE1 B:GLU2190 3.0 42.4 1.0
HB3 B:LYS2187 3.1 46.4 1.0
CG B:LYS2187 3.4 45.3 1.0
CB B:LYS2187 3.6 43.6 1.0
HB2 B:LYS2187 3.6 46.8 1.0
HG13 B:ILE2237 3.7 28.6 1.0
HG3 B:LYS2187 3.8 47.4 1.0
PA B:ANP3000 3.9 70.3 1.0
HD21 B:LEU2192 4.0 33.0 1.0
O1A B:ANP3000 4.2 58.7 1.0
CG B:GLU2190 4.3 36.2 1.0
HG12 B:ILE2237 4.4 29.4 1.0
HD3 B:LYS2187 4.4 49.6 1.0
HG2 B:GLU2190 4.4 37.6 1.0
H5'1 B:ANP3000 4.4 54.1 1.0
CD B:LYS2187 4.5 54.5 1.0
CG1 B:ILE2237 4.5 23.8 1.0
HE3 B:LYS2187 4.5 49.6 1.0
HG3 B:GLU2190 4.6 37.1 1.0
O5' B:ANP3000 4.6 58.7 1.0
HD23 B:LEU2185 4.7 37.6 1.0
CD2 B:LEU2192 4.9 33.4 1.0
HB3 B:PRO2169 5.0 54.7 1.0

Reference:

M.Anandapadamanaban, I.M.Hay, O.Perisic, R.L.Williams. Cryoem Structure of MTORC1 with A Paediatric Kidney Cancer-Associated 1455-Ewed-1458 Duplication in Mtor, Focused on One Protomer Copy. To Be Published.
Page generated: Fri Oct 4 17:31:18 2024

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